PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG021220.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 147aa MW: 17353.7 Da PI: 10.2059 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 30.6 | 8e-10 | 94 | 141 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 WT eE ++l+++v+++G g+W+++ r+ R + ++k++w++ + TRIDC1AG021220.1 94 HWTLEEVKKLIRGVRRYGEGRWTKVKRHYFssSVRKPTHLKDKWRNIR 141 5****************************9996799*********975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence |
EAILADPLDW LPSSVTIPRP SQVEEYFSYV YGDDDMEINK FAQEPEDGQC HQQYLGEFIL 60 NKNGRCAPQG PRKRRIFPSE SRGKKLHSRK NNEHWTLEEV KKLIRGVRRY GEGRWTKVKR 120 HYFSSSVRKP THLKDKWRNI RRACGVP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72650.1 | 2e-14 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG021220.1 |