PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG020970.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

E2F/DP

Protein Properties

Length: 346aa MW: 38331.8 Da PI: 10.5421

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG020970.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	84.8	6.9e-27	91	177	3	71
E2F_TDP 3 eksLrlltqkflklleksee.givtlnevakeLvse.....................dvknkrRRiYDilNVLealnliekkekneirwkg 71 +++Lr++++k ++ek+e g++t+neva+eLv+e d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg TRIDC1AG020970.4 91 NRGLRQFSMK---VCEKVEGkGRTTYNEVADELVAEfadpnsnigspdpdnpntqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 177 689*****...*999********************************************************.*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
WSPAPVVPAA WLTRLPTAPE APVPPPAASG PARGLRRRPP RPRRQRPRRP AGAPLPAASM 60 ISKFREMTRH RRSPFKKKKK GTRVVGPDKG NRGLRQFSMK VCEKVEGKGR TTYNEVADEL 120 VAEFADPNSN IGSPDPDNPN TQQYDEKNIR RRVYDALNVL MAMDIISKDK KEIQWKGLPR 180 TSLSDIDKLK TEVIGLKGRI DKKSAYLQEL QDQYAGLQNL VERNGQLYGS GDAPSGGVAL 240 PFILVQTRPH ATVEVEISED MQLVHFDFNS TPFELHDDSF VLKAMGFSGK EETDGTVALV 300 ANAVECSSAS NVYGRRSPQP ARPNGIRLRT SPPIPGILKG RVKHEH

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

WSPAPVVPAA WLTRLPTAPE APVPPPAASG PARGLRRRPP RPRRQRPRRP AGAPLPAASM  60
ISKFREMTRH RRSPFKKKKK GTRVVGPDKG NRGLRQFSMK VCEKVEGKGR TTYNEVADEL  120
VAEFADPNSN IGSPDPDNPN TQQYDEKNIR RRVYDALNVL MAMDIISKDK KEIQWKGLPR  180
TSLSDIDKLK TEVIGLKGRI DKKSAYLQEL QDQYAGLQNL VERNGQLYGS GDAPSGGVAL  240
PFILVQTRPH ATVEVEISED MQLVHFDFNS TPFELHDDSF VLKAMGFSGK EETDGTVALV  300
ANAVECSSAS NVYGRRSPQP ARPNGIRLRT SPPIPGILKG RVKHEH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	36	50	RRRPPRPRRQRPRRP
2	37	51	RRRPPRPRRQRPRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03415.1	1e-122	E2F/DP family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG020970.4