PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG018130.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 217aa MW: 24165.4 Da PI: 10.3815 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 97.9 | 4.1e-31 | 53 | 103 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs +g+lyeys+ TRIDC1AG018130.3 53 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSGRGRLYEYSN 103 79***********************************************95 PP | |||||||
2 | K-box | 103.5 | 2.6e-34 | 120 | 216 | 3 | 99 |
K-box 3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 +ss ++e +a+++qqe+akLk++i +Lq+++R l+G+ + ++s+++L+qLe +L+k+l kiR++Knell+++ie++q++e elq++n Lr TRIDC1AG018130.3 120 TSSAGTVAEINAQHYQQESAKLKQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLCAEIEYMQRREMELQNNNFFLR 212 4455559999*********************************************************************************** PP K-box 96 kkle 99 +k+ TRIDC1AG018130.3 213 EKVS 216 *985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
PKKGPRSSSS RESGIFTAQP EIQPVKESAS PGSGSGSAGG AAEKMGRGRI EIKRIENTTN 60 RQVTFCKRRN GLLKKAYELS VLCDAEVALI VFSGRGRLYE YSNNSVKATI ERYKKATSDT 120 SSAGTVAEIN AQHYQQESAK LKQQITTLQN SNRTLIGDTM ATMSHRDLKQ LEGRLDKGLG 180 KIRARKNELL CAEIEYMQRR EMELQNNNFF LREKVST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18960.1 | 5e-93 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG018130.3 |