PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC1AG015260.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 200aa MW: 22221.4 Da PI: 8.2962 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.6 | 9.3e-16 | 35 | 79 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT eE+e++++a + +G + Wk+I + + ++t q++s+ qk+ TRIDC1AG015260.1 35 RERWTDEEHERFLHALHIFGRD-WKSIEALVA-TKTSVQIRSHAQKH 79 78******************77.*********.************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 200 aa Download sequence |
MATMVRGVRM PAAARSSAAG RNKKLRKTYT ITRPRERWTD EEHERFLHAL HIFGRDWKSI 60 EALVATKTSV QIRSHAQKHF LKAQKLGLGA CLPPPLHPRR GAALGQQPPA HPDADMLEPS 120 MDWACAAPES RWPDLDAPGA EEWPSAGALH LQDETVELPL SPHDLRFALV YRFVGDVFAS 180 DAAVPVDAQL HRLQLQGVDP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G01280.1 | 2e-33 | MYB_related family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC1AG015260.1 |