PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG012500.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ZF-HD | ||||||||
Protein Properties | Length: 286aa MW: 32001.1 Da PI: 8.4826 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 87 | 2e-27 | 24 | 81 | 3 | 59 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 +++Y+eC +NhA + Ggh+vDGCgE+mp + + ++a++ kCaACgCHR+FHR+ ++e TRIDC1AG012500.1 24 EAKYNECGRNHALASGGHVVDGCGEWMPLGDLNpADASSYKCAACGCHRSFHRKVMTE 81 689**************************999999*******************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 286 aa Download sequence |
MDVKYPSGSV KKVRQAAVAP AVQEAKYNEC GRNHALASGG HVVDGCGEWM PLGDLNPADA 60 SSYKCAACGC HRSFHRKVMT ERSPMLAPMV ETVLHGLPQR RKEETPEDWL PGVDSDTNSD 120 GMKYDSDATE YDSEGTEYDD ERSVPQPLQP PPVYHPAQVR QQLSSGQHNF LPRALQIQRL 180 AAQLSPATAP PPHGVMLERK RSRTTTDQKL RMEELSEHLG WRLQKRDKDF IEARCHDIGV 240 SKKVFRNWMN NKKRKYPSGH NPSAAASSVV EPSRLRLPPP PSHHQC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15210.1 | 6e-28 | ZF-HD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG012500.1 |