PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG010550.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 294aa    MW: 32908.2 Da    PI: 5.8365
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG010550.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B359.17.9e-1936126199
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       f+k +  s+v +  +l +p +f++eh   ++ ++t++lede+g +++ ++  rk++    l++GW++F+  ++Lk+gD vvF+l+++++f  +
  TRIDC1AG010550.4  36 FVKLMQISHVVRVFWLGVPVSFCREHL--PNHDVTIVLEDEDGLRFDTNYLARKQG----LSGGWSRFATGHHLKVGDAVVFQLVEQTRF--K 120
                       88999999******************6..34789****************555555....9**********************9986777..9 PP

                       EEEE-S CS
                B3  94 vkvfrk 99 
                       v ++r+
  TRIDC1AG010550.4 121 VYILRE 126
                       988886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MHMNLQTSYS VLGFYATAFD RALEVEKKLP AEGPSFVKLM QISHVVRVFW LGVPVSFCRE  60
HLPNHDVTIV LEDEDGLRFD TNYLARKQGL SGGWSRFATG HHLKVGDAVV FQLVEQTRFK  120
VYILRESKFT TTDGALSLLS LDTSMENNMP EKGGEDTSDE DVKSKEDPEV TKVITNKASD  180
DDSNDPFSEA AANGGIRSPD PDPDFDAVKT FRAFKMVIDS SFIDRKLVPD RLLWTYYKLC  240
GDRKAFLHRR LPKHINLTLA AGVIVETASI AEGIRSYPSS CSSCEDLLHT QAPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.16e-34B3 family protein