PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG010550.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 438aa    MW: 48396.6 Da    PI: 8.3174
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG010550.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B358.11.6e-18180270199
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       f+k +  s+v +  +l +p +f++eh   ++ ++t++lede+g +++ ++  rk++    l++GW++F+  ++Lk+gD vvF+l+++++f  +
  TRIDC1AG010550.3 180 FVKLMQISHVVRVFWLGVPVSFCREHL--PNHDVTIVLEDEDGLRFDTNYLARKQG----LSGGWSRFATGHHLKVGDAVVFQLVEQTRF--K 264
                       88999999******************6..34789****************555555....9**********************9986777..9 PP

                       EEEE-S CS
                B3  94 vkvfrk 99 
                       v ++r+
  TRIDC1AG010550.3 265 VYILRE 270
                       988886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 438 aa     Download sequence    
MGGTPAGDSP HSARTKMGQK MSLAHRRLSL LDDGSRISRH IAAAAAAADD DGGGSEQMGE  60
EFTVDVAQKN TAVDDSDDPD GSGDDFVPLI MMRTKNVKSE PGKHPGFRYK HKAQRTINKT  120
YKRKKTGRSA GPVYAKRKIE KKPRLVGSNN ISKISDDDGQ KKYARALEVE KKLPAEGPSF  180
VKLMQISHVV RVFWLGVPVS FCREHLPNHD VTIVLEDEDG LRFDTNYLAR KQGLSGGWSR  240
FATGHHLKVG DAVVFQLVEQ TRFKVYILRE SKFTTTDGAL SLLSLDTSME NNMPEKGGED  300
TSDEDVKSKE DPEVTKVITN KASDDDSNDP FSEAAANGGI RSPDPDPDFD AVKTFRAFKM  360
VIDSSFIDRK LVPDRLLWTY YKLCGDRKAF LHRRLPKHIN LTLAAGVIVE TASIAEGIRS  420
YPSSCSSCED LLHTQAPR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1122142KRKKTGRSAGPVYAKRKIEKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.14e-33B3 family protein