PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG010550.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 449aa    MW: 49568.9 Da    PI: 8.0317
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG010550.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3581.7e-18191281199
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       f+k +  s+v +  +l +p +f++eh   ++ ++t++lede+g +++ ++  rk++    l++GW++F+  ++Lk+gD vvF+l+++++f  +
  TRIDC1AG010550.1 191 FVKLMQISHVVRVFWLGVPVSFCREHL--PNHDVTIVLEDEDGLRFDTNYLARKQG----LSGGWSRFATGHHLKVGDAVVFQLVEQTRF--K 275
                       88999999******************6..34789****************555555....9**********************9986777..9 PP

                       EEEE-S CS
                B3  94 vkvfrk 99 
                       v ++r+
  TRIDC1AG010550.1 276 VYILRE 281
                       988886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    
MGGTPAGDSP HSARTKMGQK MSLAHRRLSL LDDGSRISRH IAAAAAAADD DGGGSEQMGE  60
EFTVDVAQKN TAVDDSDDPD GSGDDFVPLI MMRTKNVKSE PGKHPGFRYK HKAQRTINKT  120
YKRKKTGRSA GPVYAKRKIE KKPRLVGSNN ISKISDDDGQ KKYASVLGFY ATAFDRALEV  180
EKKLPAEGPS FVKLMQISHV VRVFWLGVPV SFCREHLPNH DVTIVLEDED GLRFDTNYLA  240
RKQGLSGGWS RFATGHHLKV GDAVVFQLVE QTRFKVYILR ESKFTTTDGA LSLLSLDTSM  300
ENNMPEKGGE DTSDEDVKSK EDPEVTKVIT NKASDDDSND PFSEAAANGG IRSPDPDPDF  360
DAVKTFRAFK MVIDSSFIDR KLVPDRLLWT YYKLCGDRKA FLHRRLPKHI NLTLAAGVIV  420
ETASIAEGIR SYPSSCSSCE DLLHTQAPR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1122142KRKKTGRSAGPVYAKRKIEKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.15e-33B3 family protein