PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG010090.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TALE

Protein Properties

Length: 306aa MW: 33110.3 Da PI: 5.4526

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG010090.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.8	2.1e-09	237	270	22	55
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++e++ +LA+ +gL+ +q+ +WF N+R ++ TRIDC1AG010090.3 237 WPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRH 270 59*****************************885 PP
2	ELK	33.1	1.2e-11	190	211	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++Ll+KYsg+L+ L++EF+ TRIDC1AG010090.3 190 ELKEMLLKKYSGCLSRLRSEFL 211 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence
MEDLYSIHPG ISRGGEGGAA CSEASGVAGG ASSPPPPPPP ADLTELMKAQ IAGHPRYPSL 60 LSAYIECRKV GAPPEVAALL EEIGQPERRS GGAAAAGEIG LDPELDEFMV AYCRLLSRYK 120 EELSRPLDEA ASFLTTIRSQ LTNLCGGGAP ATSPHSDEMV GSSEDEPCSG DADGSDAGMQ 180 EHSSRLADHE LKEMLLKKYS GCLSRLRSEF LKKRKKGKLP KDARLALMDW WNTHYRWPYP 240 TEEDKVRLAA MTGLDPKQIN NWFINQRKRH WKPSEDMRFA LMEGVTGGGG SSSGTTLYFD 300 TGTIGP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	206	215	LRSEFLKKRK
2	212	216	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	5e-79	TALE family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG010090.3