PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG010080.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family TALE
Protein Properties Length: 308aa    MW: 33938.1 Da    PI: 5.7325
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG010080.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.82.1e-092402722355
                       SS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
          Homeobox  23 rypsaeereeLAkklgLterqVkvWFqNrRake 55 
                       +yp+++++ +LA+ +gL+ rq+ +WF N+R ++
  TRIDC1AG010080.2 240 PYPTEDDKVRLAAMTGLDPRQINNWFVNQRKRH 272
                       8*****************************885 PP
2ELK34.44.6e-12192213122
               ELK   1 ELKhqLlrKYsgyLgsLkqEFs 22 
                       EL+++Ll+KYsg+L+ L++EF+
  TRIDC1AG010080.2 192 ELREMLLNKYSGCLSHLRTEFL 213
                       9********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MEDLYSIHPG ISRRGEGDAA CSEVSGVAGD ASSPPPPPPQ ADLTELMKTQ IAGHRRYPSL  60
LSAYIECRKV GATPEVASLL EEVGRPERRG GGAAAAAGEI GLDPELDEFM QEAYCRLLSR  120
YKVELSRPLD EAASFLTTIR SQFKKLCGGG ATATSPHSDE MVESSEDEPC SGDTGASDAG  180
MQEQSSRLAD RELREMLLNK YSGCLSHLRT EFLKKRKKGK LPKDARLALV DWWNTHYRWP  240
YPTEDDKVRL AAMTGLDPRQ INNWFVNQRK RHWKPSEDMR FALMEGVTGG GGGSSYDTTL  300
CFGTDSMR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1208217LRTEFLKKRK
2214218KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G23380.11e-73TALE family protein