PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG009520.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 406aa MW: 44168.1 Da PI: 8.5373

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG009520.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.7	9.8e-33	144	203	1	60
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 ++DgynWrKYGqK+vkgse+prsYY+Ct+++C++kkkvers d+++++i+Y+g H+h+k TRIDC1AG009520.7 144 VEDGYNWRKYGQKQVKGSENPRSYYKCTYNNCSMKKKVERSLADGRITQIVYKGAHDHPK 203 58********************************************************85 PP
2	WRKY	103.6	1.1e-32	289	347	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYGqK+vkg+++prsYY+Ct+ gCpv+k+ver+++d+++v++tYeg+H h+ TRIDC1AG009520.7 289 LDDGFRWRKYGQKVVKGNPNPRSYYKCTTVGCPVRKHVERASHDNRAVITTYEGKHSHD 347 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
VLLHGELGPR RVHVHRSPRG FNRGGRAGAP KFKSAQPPSL PISSPFSCFS VPAGLSPAEL 60 LDSPVLLNYS HILASPTTGA IPAQRCDWQA SADLNTFQQD ELGLSGFSFH AVKSNATEQQ 120 EQQQEEVVQV SNKSSSSSGN NKQVEDGYNW RKYGQKQVKG SENPRSYYKC TYNNCSMKKK 180 VERSLADGRI TQIVYKGAHD HPKPLSTRRN SSGCAAVVAE DHTNGSEHSG PTPENSSVTF 240 GDDEADKPET KRRKEHGDNE GSSGGTGGCG KPVREPRLVV QTLSDIDILD DGFRWRKYGQ 300 KVVKGNPNPR SYYKCTTVGC PVRKHVERAS HDNRAVITTY EGKHSHDVPI GRGRALLASS 360 SSDSSAVIWP AAAVQAPCTL EMLAGHPGYA AKDEPRDDMF VESLLC

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

VLLHGELGPR RVHVHRSPRG FNRGGRAGAP KFKSAQPPSL PISSPFSCFS VPAGLSPAEL  60
LDSPVLLNYS HILASPTTGA IPAQRCDWQA SADLNTFQQD ELGLSGFSFH AVKSNATEQQ  120
EQQQEEVVQV SNKSSSSSGN NKQVEDGYNW RKYGQKQVKG SENPRSYYKC TYNNCSMKKK  180
VERSLADGRI TQIVYKGAHD HPKPLSTRRN SSGCAAVVAE DHTNGSEHSG PTPENSSVTF  240
GDDEADKPET KRRKEHGDNE GSSGGTGGCG KPVREPRLVV QTLSDIDILD DGFRWRKYGQ  300
KVVKGNPNPR SYYKCTTVGC PVRKHVERAS HDNRAVITTY EGKHSHDVPI GRGRALLASS  360
SSDSSAVIWP AAAVQAPCTL EMLAGHPGYA AKDEPRDDMF VESLLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G07100.1	2e-90	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG009520.7