PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG009380.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 1301aa MW: 140731 Da PI: 5.4535

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG009380.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.1	4.8e-09	755	797	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT eE e + + + +G++ +++I++ ++ ++t +c+++++k+ TRIDC1AG009380.5 755 PWTHEEKEVFMQMLASFGKN-FSKISNFLQ-HKTTADCVEFYYKH 797 8***************99.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1301 aa Download sequence
MPPPPPDRRE FLYRDGRRHD VAAGDPLLPA PPATPRWRDS PYHPPPPPPP LRDHARPSPR 60 RTASSASSEG YYRQGAGAYD RSYPDEPLGY TPSRSDRYWL EEDPPAGYKG FSRYGGGGGR 120 RDGRDLRGSY RRSPFRSYGG DFPRGHQEPP PPPPLRRSPL RSVAVPICYD PPSDRADRED 180 RDHQPRATPW RPLRRRESRS DAADAAGAGP LSARQSATAG AASEKNAPSQ SAAVADSQSA 240 EEETPRKKPR LGWGQGLAKY EKQKVPGSSE SAEPVAEGSP GGVEQKEVDG APAPALCASP 300 VAAPPSAPPS SSPVPEDKSC ELTTNTVTVS NKDIPGAEVQ AYNDEIPIKL GQLDGDRIGS 360 LANVLAELLQ HEDSCSGDSR RLTNSSKLLL LKENIARELE KTELEIDSLE CELKSVSTES 420 ENKALEDAQN PSPSSGTSKV LAMPEICGTS SSPKEQGVLT PCKLSVGQEA DANGVDLMDV 480 VTAPVRSVTA VSSGESVACP GVVAEAQVAV AADVAPLKPS EGTGSEIDAH CLTPEPGLSH 540 DNVSSMKADG SNALSTRQCS QHIDSHNLIP SIIAVNNDIA KEFNELVFKP LPAGQPCLGL 600 SSEMKNDLSV RKKLGIHKNR LRFKEQALTF KFKVLRHLWK EDVRLLSVRK QRPKSNKRTD 660 QSNRASQSGS QRQRSSNRSR LGMPAGNVST FPTTEISDVA NKMFTEFQFK RCRNYLKMPA 720 LIIDEKEKES ASFVSKNGLI EDPVSVEKER SVINPWTHEE KEVFMQMLAS FGKNFSKISN 780 FLQHKTTADC VEFYYKHHKS DSFREVKKLL DLRQQQPTGN YLGTKSGKKW NPENAASLDM 840 LGNAASVVAA HGLDYANRVE KDTAKSIIRT SCRSDVSAVA KGSLDKDGIA NVSLHERESV 900 AADVLAGICG TLSPEGMGSC ITSSADHGQK IGATRMEYLI ATPEADKSFD EEDDLSDQEC 960 EVDSVDWYDN EKSLFIEALN NHGKDFARIS SYVKSKSYEQ CKVFFSKARI SLGLDLIYQQ 1020 TTDAGLPTGD ASGGRSDTDE ACAAEMDSPI CSTQSPVEME MEVCPSADKT LQGHLLSGIA 1080 FKQSETDRSD GPDIVDLTFE EGEIKAEDTN NCNIPVDHRQ SSEATHESTP SCAPIDINSS 1140 ESTGSMENRE HSNQVSAHGN GAMASSTELP VGAHLEISSS LHNVEVIEPS KVSEMICTQV 1200 SSIEGPSEHA PESAHVKAGN STPSVCLPGE SGSKENVTHF SDMAGVSCIR PAFTSSYQQS 1260 VPTDLLPAKP KSQVTPLAPK DLMPVQFSSD LPILPQFVLR A

Sequence ? help Back to Top

Protein Sequence Length: 1301 aa Download sequence

MPPPPPDRRE FLYRDGRRHD VAAGDPLLPA PPATPRWRDS PYHPPPPPPP LRDHARPSPR  60
RTASSASSEG YYRQGAGAYD RSYPDEPLGY TPSRSDRYWL EEDPPAGYKG FSRYGGGGGR  120
RDGRDLRGSY RRSPFRSYGG DFPRGHQEPP PPPPLRRSPL RSVAVPICYD PPSDRADRED  180
RDHQPRATPW RPLRRRESRS DAADAAGAGP LSARQSATAG AASEKNAPSQ SAAVADSQSA  240
EEETPRKKPR LGWGQGLAKY EKQKVPGSSE SAEPVAEGSP GGVEQKEVDG APAPALCASP  300
VAAPPSAPPS SSPVPEDKSC ELTTNTVTVS NKDIPGAEVQ AYNDEIPIKL GQLDGDRIGS  360
LANVLAELLQ HEDSCSGDSR RLTNSSKLLL LKENIARELE KTELEIDSLE CELKSVSTES  420
ENKALEDAQN PSPSSGTSKV LAMPEICGTS SSPKEQGVLT PCKLSVGQEA DANGVDLMDV  480
VTAPVRSVTA VSSGESVACP GVVAEAQVAV AADVAPLKPS EGTGSEIDAH CLTPEPGLSH  540
DNVSSMKADG SNALSTRQCS QHIDSHNLIP SIIAVNNDIA KEFNELVFKP LPAGQPCLGL  600
SSEMKNDLSV RKKLGIHKNR LRFKEQALTF KFKVLRHLWK EDVRLLSVRK QRPKSNKRTD  660
QSNRASQSGS QRQRSSNRSR LGMPAGNVST FPTTEISDVA NKMFTEFQFK RCRNYLKMPA  720
LIIDEKEKES ASFVSKNGLI EDPVSVEKER SVINPWTHEE KEVFMQMLAS FGKNFSKISN  780
FLQHKTTADC VEFYYKHHKS DSFREVKKLL DLRQQQPTGN YLGTKSGKKW NPENAASLDM  840
LGNAASVVAA HGLDYANRVE KDTAKSIIRT SCRSDVSAVA KGSLDKDGIA NVSLHERESV  900
AADVLAGICG TLSPEGMGSC ITSSADHGQK IGATRMEYLI ATPEADKSFD EEDDLSDQEC  960
EVDSVDWYDN EKSLFIEALN NHGKDFARIS SYVKSKSYEQ CKVFFSKARI SLGLDLIYQQ  1020
TTDAGLPTGD ASGGRSDTDE ACAAEMDSPI CSTQSPVEME MEVCPSADKT LQGHLLSGIA  1080
FKQSETDRSD GPDIVDLTFE EGEIKAEDTN NCNIPVDHRQ SSEATHESTP SCAPIDINSS  1140
ESTGSMENRE HSNQVSAHGN GAMASSTELP VGAHLEISSS LHNVEVIEPS KVSEMICTQV  1200
SSIEGPSEHA PESAHVKAGN STPSVCLPGE SGSKENVTHF SDMAGVSCIR PAFTSSYQQS  1260
VPTDLLPAKP KSQVTPLAPK DLMPVQFSSD LPILPQFVLR A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	5e-70	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG009380.5