PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG009380.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 765aa MW: 83442.2 Da PI: 5.4506

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG009380.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29	2.6e-09	313	355	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT eE e + + + +G++ +++I++ ++ ++t +c+++++k+ TRIDC1AG009380.4 313 PWTHEEKEVFMQMLASFGKN-FSKISNFLQ-HKTTADCVEFYYKH 355 8***************99.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 765 aa Download sequence
MPEICGTSSS PKEQGVLTPC KLSVGQEADA NGVDLMDVVT APVRSVTAVS SGESVACPGV 60 VAEAQVAVAA DVAPLKPSEG TGSEIDAHCL TPEPGLSHDN VSSMKADGSN ALSTRQCSQH 120 IDSHNLIPSI IAVNNDIAKE FNELVFKPLP AGQPCLGLSS EMKNDLSVRK KLGIHKNRLR 180 FKEQALTFKF KVLRHLWKED VRLLSVRKQR PKSNKRTDQS NRASQSGSQR QRSSNRSRLG 240 MPAGNVSTFP TTEISDVANK MFTEFQFKRC RNYLKMPALI IDEKEKESAS FVSKNGLIED 300 PVSVEKERSV INPWTHEEKE VFMQMLASFG KNFSKISNFL QHKTTADCVE FYYKHHKSDS 360 FREVKKLLDL RQQQPTGNYL GTKSGKKWNP ENAASLDMLG NAASVVAAHG LDYANRVEKD 420 TAKSIIRTSC RSDVSAVAKG SLDKDGIANV SLHERESVAA DVLAGICGTL SPEGMGSCIT 480 SSADHGQKIG ATRMEYLIAT PEADKSFDEE DDLSDQECEV DSVDWYDNEK SLFIEALNNH 540 GKDFARISSY VKSKSYEQCK VFFSKARISL GLDLIYQQTT DAGLPTGDAS GGRSDTDEAC 600 AAEMDSPICS TQSPVEMEME VCPSADKTLQ GHLLSGIAFK QSETDRSDGP DIVDLTFEEG 660 EIKAEDTNNC NIPVDHRQSS EATHESTPSC APIDINSSES TGSMENREHS NQVSAHGNGA 720 MASSTELPVG AHLEISSSLH NVEVIEPIRY PVSKDLQNMH LRVHT

Sequence ? help Back to Top

Protein Sequence Length: 765 aa Download sequence

MPEICGTSSS PKEQGVLTPC KLSVGQEADA NGVDLMDVVT APVRSVTAVS SGESVACPGV  60
VAEAQVAVAA DVAPLKPSEG TGSEIDAHCL TPEPGLSHDN VSSMKADGSN ALSTRQCSQH  120
IDSHNLIPSI IAVNNDIAKE FNELVFKPLP AGQPCLGLSS EMKNDLSVRK KLGIHKNRLR  180
FKEQALTFKF KVLRHLWKED VRLLSVRKQR PKSNKRTDQS NRASQSGSQR QRSSNRSRLG  240
MPAGNVSTFP TTEISDVANK MFTEFQFKRC RNYLKMPALI IDEKEKESAS FVSKNGLIED  300
PVSVEKERSV INPWTHEEKE VFMQMLASFG KNFSKISNFL QHKTTADCVE FYYKHHKSDS  360
FREVKKLLDL RQQQPTGNYL GTKSGKKWNP ENAASLDMLG NAASVVAAHG LDYANRVEKD  420
TAKSIIRTSC RSDVSAVAKG SLDKDGIANV SLHERESVAA DVLAGICGTL SPEGMGSCIT  480
SSADHGQKIG ATRMEYLIAT PEADKSFDEE DDLSDQECEV DSVDWYDNEK SLFIEALNNH  540
GKDFARISSY VKSKSYEQCK VFFSKARISL GLDLIYQQTT DAGLPTGDAS GGRSDTDEAC  600
AAEMDSPICS TQSPVEMEME VCPSADKTLQ GHLLSGIAFK QSETDRSDGP DIVDLTFEEG  660
EIKAEDTNNC NIPVDHRQSS EATHESTPSC APIDINSSES TGSMENREHS NQVSAHGNGA  720
MASSTELPVG AHLEISSSLH NVEVIEPIRY PVSKDLQNMH LRVHT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	7e-73	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG009380.4