PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG009380.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 1233aa MW: 132584 Da PI: 5.2611

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG009380.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.2	4.5e-09	715	757	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT eE e + + + +G++ +++I++ ++ ++t +c+++++k+ TRIDC1AG009380.1 715 PWTHEEKEVFMQMLASFGKN-FSKISNFLQ-HKTTADCVEFYYKH 757 8***************99.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1233 aa Download sequence
AYDRSYPDEP LGYTPSRSDR YWLEEDPPAG YKGFSRYGGG GGRRDGRDLR GSYRRSPFRS 60 YGGDFPRGHQ EPPPPPPLRR SPLRSVAVPI CYDPPSDRAD REDRDHQPRA TPWRPLRRRE 120 SRSDAADAAG AGPLSARQSA TAGAASEKNA PSQSAAVADS QSAEEETPRK KPRLGWGQGL 180 AKYEKQKVPG SSESAEPVAE GSPGGVEQKE VDGAPAPALC ASPVAAPAAP PPAPALCASP 240 VAAPAAPSAP PSSSPVPEDK SCELTTNTVT VSNKDIPGAE VQAYNDEIPI KLGQLDGDRI 300 GSLANVLAEL LQHEDSCSGD SRRLTNSSKL LLLKENIARE LEKTELEIDS LECELKSVST 360 ESENKALEDA QNPSPSSGTS KTLAKPATSK VLAKPETSKV LAMPEICGTS SSPKEQGVLT 420 PCKLSVGQEA DANGVDLMDV VTAPVRSVTA VSSGESVACP GVVAEAQVAV AADVAPLKPS 480 EGTGSEIDAH CLTPEPGLSH DNVSSMKADG SNALSTRQCS QHIDSHNLIP SIIAVNNDIA 540 KEFNELVFKP LPAGQPCLGL SSEMKNDLSV RKKLGIHKNR LRFKEQALTF KFKVLRHLWK 600 EDVRLLSVRK QRPKSNKRTD QSNRASQSGS QRQRSSNRSR LGMPAGNVST FPTTEISDVA 660 NKMFTEFQFK RCRNYLKMPA LIIDEKEKES ASFVSKNGLI EDPVSVEKER SVINPWTHEE 720 KEVFMQMLAS FGKNFSKISN FLQHKTTADC VEFYYKHHKS DSFREVKKLL DLRQQQPTGN 780 YLGTKSGKKW NPENAASLDM LGNAASVVAA HGLDYANRVE KDTAKSIIRT SCRSDVSAVA 840 KGSLDKDGIA NVSLHERESV AADVLAGICG TLSPEGMGSC ITSSADHGQK IGATRMEYLI 900 ATPEADKSFD EEDDLSDQEC EVDSVDWYDN EKSLFIEALN NHGKDFARIS SYVKSKSYEQ 960 CKVFFSKARI SLGLDLIYQQ TTDAGLPTGD ASGGRSDTDE ACAAEMDSPI CSTQSPVEME 1020 MEVCPSADKT LQGHLLSGIA FKQSETDRSD GPDIVDLTFE EGEIKAEDTN NCNIPVDHRQ 1080 SSEATHESTP SCAPIDINSS ESTGSMENRE HSNQVSAHGN GAMASSTELP VGAHLEISSS 1140 LHNVEVIEPS KVSEMICTQV SSREHAPESG APISAGNLTT PVFLPGVIQS SKVYEGICTK 1200 ESSVEGPSQQ APLSAHMKAG NLTLSVCFTW GTL

Sequence ? help Back to Top

Protein Sequence Length: 1233 aa Download sequence

AYDRSYPDEP LGYTPSRSDR YWLEEDPPAG YKGFSRYGGG GGRRDGRDLR GSYRRSPFRS  60
YGGDFPRGHQ EPPPPPPLRR SPLRSVAVPI CYDPPSDRAD REDRDHQPRA TPWRPLRRRE  120
SRSDAADAAG AGPLSARQSA TAGAASEKNA PSQSAAVADS QSAEEETPRK KPRLGWGQGL  180
AKYEKQKVPG SSESAEPVAE GSPGGVEQKE VDGAPAPALC ASPVAAPAAP PPAPALCASP  240
VAAPAAPSAP PSSSPVPEDK SCELTTNTVT VSNKDIPGAE VQAYNDEIPI KLGQLDGDRI  300
GSLANVLAEL LQHEDSCSGD SRRLTNSSKL LLLKENIARE LEKTELEIDS LECELKSVST  360
ESENKALEDA QNPSPSSGTS KTLAKPATSK VLAKPETSKV LAMPEICGTS SSPKEQGVLT  420
PCKLSVGQEA DANGVDLMDV VTAPVRSVTA VSSGESVACP GVVAEAQVAV AADVAPLKPS  480
EGTGSEIDAH CLTPEPGLSH DNVSSMKADG SNALSTRQCS QHIDSHNLIP SIIAVNNDIA  540
KEFNELVFKP LPAGQPCLGL SSEMKNDLSV RKKLGIHKNR LRFKEQALTF KFKVLRHLWK  600
EDVRLLSVRK QRPKSNKRTD QSNRASQSGS QRQRSSNRSR LGMPAGNVST FPTTEISDVA  660
NKMFTEFQFK RCRNYLKMPA LIIDEKEKES ASFVSKNGLI EDPVSVEKER SVINPWTHEE  720
KEVFMQMLAS FGKNFSKISN FLQHKTTADC VEFYYKHHKS DSFREVKKLL DLRQQQPTGN  780
YLGTKSGKKW NPENAASLDM LGNAASVVAA HGLDYANRVE KDTAKSIIRT SCRSDVSAVA  840
KGSLDKDGIA NVSLHERESV AADVLAGICG TLSPEGMGSC ITSSADHGQK IGATRMEYLI  900
ATPEADKSFD EEDDLSDQEC EVDSVDWYDN EKSLFIEALN NHGKDFARIS SYVKSKSYEQ  960
CKVFFSKARI SLGLDLIYQQ TTDAGLPTGD ASGGRSDTDE ACAAEMDSPI CSTQSPVEME  1020
MEVCPSADKT LQGHLLSGIA FKQSETDRSD GPDIVDLTFE EGEIKAEDTN NCNIPVDHRQ  1080
SSEATHESTP SCAPIDINSS ESTGSMENRE HSNQVSAHGN GAMASSTELP VGAHLEISSS  1140
LHNVEVIEPS KVSEMICTQV SSREHAPESG APISAGNLTT PVFLPGVIQS SKVYEGICTK  1200
ESSVEGPSQQ APLSAHMKAG NLTLSVCFTW GTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	2e-70	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG009380.1