PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG008490.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | LBD | ||||||||
Protein Properties | Length: 175aa MW: 17296.2 Da PI: 4.6707 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 51.6 | 2.7e-16 | 40 | 91 | 49 | 100 |
DUF260 49 lpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 lpee+r da+ss+vyeA arardPvyG++g i +lq+q++ lka+la++++e TRIDC1AG008490.1 40 LPEEQRADAVSSMVYEAAARARDPVYGSAGAICQLQRQVDGLKAQLARAQAE 91 799********************************************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
GRHGAVALLT DPDVAAGNGD GGGGGDEPVR GVQDPPPPDL PEEQRADAVS SMVYEAAARA 60 RDPVYGSAGA ICQLQRQVDG LKAQLARAQA ELAAARAHHA HLVALLCVEV ATAAATPPQD 120 AYCTGGGGSQ TQLAAPPGVG SAHADALYVV NGGAAGGGGI MQAGHVGWAD VPLWT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07900.1 | 4e-12 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG008490.1 |