PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG007920.7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | AP2 | ||||||||
Protein Properties | Length: 132aa MW: 15237.2 Da PI: 9.6021 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 41.5 | 3.4e-13 | 2 | 42 | 10 | 55 |
AP2 10 kkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g TRIDC1AG007920.7 2 RRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 42 569*********......55************************997 PP | |||||||
2 | AP2 | 29.4 | 2.1e-09 | 85 | 124 | 1 | 44 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAak 44 s+y+GV+ +k grW+A+ + +k+++lg f+ + eAa+ TRIDC1AG007920.7 85 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDNEVEAAR 124 89********.7******5553..2.26**********889997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 132 aa Download sequence |
YRRTGRWESH IWDCGKQVYL GGFDTAHAAA RAYDRAAIKF RGVDADINFN LSDYEDDMKQ 60 MKGLSKEEFV HVLRRQSTGF SRGSSKYRGV TLHKCGRWEA RMGQFLGKKY IYLGLFDNEV 120 EAARFLSLDS AH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36920.1 | 2e-73 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG007920.7 |