PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG007920.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 315aa    MW: 34904.9 Da    PI: 9.4053
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG007920.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.33.3e-17150155
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                      s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  TRIDC1AG007920.5  1 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 50
                      78*******************......55************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
SQYRGVTFYR RTGRWESHIW DCGKQVYLGG FDTAHAAARA YDRAAIKFRG VDADINFNLS  60
DYEDDMKQMK GLSKEEFVHV LRRQSTGFSR GSSKYRGVTL HKCGRWEARM GQFLGKKAYD  120
KAAIKCNGRE AVTNFEPSTY DAELLNEVAA EGADVDLNLS ISQPTSQSPK RDKSSLGLQL  180
HHGSYDGSEL KRPKVDAPPE MVAIPHRYPL LTEHPPIWHG QSYPLFLNNE EAARDHSRRP  240
EVATGAVPTW AWRVSHPPPT QPMPLFSSSS SAAASSGFSK TAAAAAPGAP SASFRFDPMA  300
PSSSSSNQHH HHHPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.13e-91AP2 family protein