PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG007920.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 323aa    MW: 35640.9 Da    PI: 8.5835
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG007920.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP241.53.3e-13122163147
                AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaai 47 
                        s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa  ++
  TRIDC1AG007920.11 122 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAASDYE 163
                        78*******************......55**********988887666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
FSILRSSASA EGENDVGADD DEEEATPSPP PPPPRHYYQH LLQPQQLVIQ ELFPAAAAGG  60
GPPAMPVPQH WAELGFFRPA APPPDMRILQ LQQQAHAPPP PPPAAQPPVA KKSRRGPRSR  120
SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAS DYEDDMKQMK GLSKEEFVHV  180
LRRQSTGFSR GSSKYRGVTL HKCGRWEARM GQFLGKKAYD KAAIKCNGRE AVTNFEPSTY  240
DAELLNEVAA EGADVDLNLS ISQPTSQSPK RDKSSLGLQL HHGSYDGSEL KRPKASTNAF  300
FKRLGNQSNF TAGFVWLSDP LCD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.23e-75AP2 family protein