PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG004620.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 189aa MW: 20462.4 Da PI: 7.2361

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG004620.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.7	0.0004	43	65	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+++F++ L H +H TRIDC1AG004620.1 43 FVCKTCDRVFPSFQALGGHRASH 65 89**********99999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 189 aa Download sequence
MTKRYAFEEK EMARMLLLVS REQAMPMPMP MAVRGDRAPE RVFVCKTCDR VFPSFQALGG 60 HRASHKKPRL DDGGNLKPKL HGCSVCGLEF AIGQALGGHM RRHRAMAVGG GGGVMAITPP 120 TAAIKKHGDS SDDAVVGMKR GLWLDLNHPP CDEYGTSSES DDECGHDAAA GGYTFHQFLD 180 TGTMEVDCV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37430.1	1e-25	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG004620.1