PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG003170.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRAS

Protein Properties

Length: 467aa MW: 53345.2 Da PI: 8.9313

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG003170.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	319.3	7.9e-98	144	467	2	325
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 ++lL++c +av+++++ la++lL+++++++s dgd qRla+y++ +L+arla+++ ++y+ l ++ts +++ l a++lf+ +P+ + s TRIDC1AG003170.7 144 KTLLINCSQAVAEDNHLLASKLLKKIRQHSSADGDCSQRLAFYLADGLEARLAGTGGQVYRNLMERQTS---TTDWLDAHSLFVASCPFDRTS 233 789**********************************************************999999...8999999********** PP GRAS 95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185 + a qaIl+ +g+ rvHi+Df+i+ G+QWp ++q++a+++eg+p+lRiTg++ p++g s e++eetg+rLa++A+ ++vpf+++ ++a+r TRIDC1AG003170.7 234 YYFASQAILDVSQGKPRVHIVDFGIGFGFQWPLMIQKFAQQEEGAPKLRITGIDVPQPGfrSCEMIEETGKRLADYANLFKVPFQYQGIAASR 326 *******************************************************99****************************** PP GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl.eaklpr 277 +e++++e+L+++++E+l++n+++++++l +e+ +++s rd+vLk+++ ++Pk+++ + ++s+ F +rf e + +ys++fd+l ++ +pr TRIDC1AG003170.7 327 WETIKIEDLNIDEDEVLIINCMFRMKNLGHETEAINSVRDKVLKIMRMMNPKIFISGTVNGLRSSPFFIKRFKEVIFHYSSMFDMLdANVVPR 419 **********************************************************************************5556899 PP GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFk 325 ++++r+++Er+++g+++ n++acegaer+er e++++W++r +aGF+ TRIDC1AG003170.7 420 DNKARKMIERMIFGKDALNIIACEGAERTERPESYRQWHARCVKAGFQ 467 99*******************************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 467 aa Download sequence
TSRSGFPGLH CQREVEEATM FAPSIDKLVI YLENGILSIS KLTTKAKVGE RSENTIFEVA 60 HQRDWDILEG RSNKHLAFTS CAIIRNENFD QVLLCYGLES FKKTTRLRRG LAEEGNKNSL 120 KGRSEGRQKL WQRKQPRTEL VDLKTLLINC SQAVAEDNHL LASKLLKKIR QHSSADGDCS 180 QRLAFYLADG LEARLAGTGG QVYRNLMERQ TSTTDWLDAH SLFVASCPFD RTSYYFASQA 240 ILDVSQGKPR VHIVDFGIGF GFQWPLMIQK FAQQEEGAPK LRITGIDVPQ PGFRSCEMIE 300 ETGKRLADYA NLFKVPFQYQ GIAASRWETI KIEDLNIDED EVLIINCMFR MKNLGHETEA 360 INSVRDKVLK IMRMMNPKIF ISGTVNGLRS SPFFIKRFKE VIFHYSSMFD MLDANVVPRD 420 NKARKMIERM IFGKDALNII ACEGAERTER PESYRQWHAR CVKAGFQ

Sequence ? help Back to Top

Protein Sequence Length: 467 aa Download sequence

TSRSGFPGLH CQREVEEATM FAPSIDKLVI YLENGILSIS KLTTKAKVGE RSENTIFEVA  60
HQRDWDILEG RSNKHLAFTS CAIIRNENFD QVLLCYGLES FKKTTRLRRG LAEEGNKNSL  120
KGRSEGRQKL WQRKQPRTEL VDLKTLLINC SQAVAEDNHL LASKLLKKIR QHSSADGDCS  180
QRLAFYLADG LEARLAGTGG QVYRNLMERQ TSTTDWLDAH SLFVASCPFD RTSYYFASQA  240
ILDVSQGKPR VHIVDFGIGF GFQWPLMIQK FAQQEEGAPK LRITGIDVPQ PGFRSCEMIE  300
ETGKRLADYA NLFKVPFQYQ GIAASRWETI KIEDLNIDED EVLIINCMFR MKNLGHETEA  360
INSVRDKVLK IMRMMNPKIF ISGTVNGLRS SPFFIKRFKE VIFHYSSMFD MLDANVVPRD  420
NKARKMIERM IFGKDALNII ACEGAERTER PESYRQWHAR CVKAGFQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37650.1	1e-127	GRAS family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG003170.7