PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG003170.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 367aa    MW: 42277.6 Da    PI: 8.549
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG003170.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS333.73.4e-102235917374
              GRAS  17 lelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIleavege 109
                       + la++lL+++++++s dgd  qRla+y++ +L+arla+++ ++y+ l  ++ts   +++ l a++lf+  +P+ + s+  a qaIl+  +g+
  TRIDC1AG003170.1   2 HLLASKLLKKIRQHSSADGDCSQRLAFYLADGLEARLAGTGGQVYRNLMERQTS---TTDWLDAHSLFVASCPFDRTSYYFASQAILDVSQGK 91 
                       5689********************************************999999...8999999***************************** PP

              GRAS 110 ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgE 200
                        rvHi+Df+i+ G+QWp ++q++a+++eg+p+lRiTg++ p++g  s e++eetg+rLa++A+ ++vpf+++ ++a+r+e++++e+L+++++E
  TRIDC1AG003170.1  92 PRVHIVDFGIGFGFQWPLMIQKFAQQEEGAPKLRITGIDVPQPGfrSCEMIEETGKRLADYANLFKVPFQYQGIAASRWETIKIEDLNIDEDE 184
                       *******************************************9*9*********************************************** PP

              GRAS 201 alaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl.eaklpreseerikvErellgr 292
                       +l++n+++++++l +e+ +++s rd+vLk+++ ++Pk+++    +  ++s+ F +rf e + +ys++fd+l ++ +pr++++r+++Er+++g+
  TRIDC1AG003170.1 185 VLIINCMFRMKNLGHETEAINSVRDKVLKIMRMMNPKIFISGTVNGLRSSPFFIKRFKEVIFHYSSMFDMLdANVVPRDNKARKMIERMIFGK 277
                       ***********************************************************************555689999************* PP

              GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                       ++ n++acegaer+er e++++W++r  +aGF+++p++  +   + ++ +++  +++   e++g+l++gWk+r ++++S W+
  TRIDC1AG003170.1 278 DALNIIACEGAERTERPESYRQWHARCVKAGFQQLPVDPAVLRIIVYMKNTFWHEEFFAVEDRGWLLQGWKGRGIYAISKWK 359
                       ****************************************************9999*************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    
NHLLASKLLK KIRQHSSADG DCSQRLAFYL ADGLEARLAG TGGQVYRNLM ERQTSTTDWL  60
DAHSLFVASC PFDRTSYYFA SQAILDVSQG KPRVHIVDFG IGFGFQWPLM IQKFAQQEEG  120
APKLRITGID VPQPGFRSCE MIEETGKRLA DYANLFKVPF QYQGIAASRW ETIKIEDLNI  180
DEDEVLIINC MFRMKNLGHE TEAINSVRDK VLKIMRMMNP KIFISGTVNG LRSSPFFIKR  240
FKEVIFHYSS MFDMLDANVV PRDNKARKMI ERMIFGKDAL NIIACEGAER TERPESYRQW  300
HARCVKAGFQ QLPVDPAVLR IIVYMKNTFW HEEFFAVEDR GWLLQGWKGR GIYAISKWKP  360
DETYDGQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-137GRAS family protein