PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG003170.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GRAS | ||||||||
Protein Properties | Length: 367aa MW: 42277.6 Da PI: 8.549 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 333.7 | 3.4e-102 | 2 | 359 | 17 | 374 |
GRAS 17 lelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIleavege 109 + la++lL+++++++s dgd qRla+y++ +L+arla+++ ++y+ l ++ts +++ l a++lf+ +P+ + s+ a qaIl+ +g+ TRIDC1AG003170.1 2 HLLASKLLKKIRQHSSADGDCSQRLAFYLADGLEARLAGTGGQVYRNLMERQTS---TTDWLDAHSLFVASCPFDRTSYYFASQAILDVSQGK 91 5689********************************************999999...8999999***************************** PP GRAS 110 ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgE 200 rvHi+Df+i+ G+QWp ++q++a+++eg+p+lRiTg++ p++g s e++eetg+rLa++A+ ++vpf+++ ++a+r+e++++e+L+++++E TRIDC1AG003170.1 92 PRVHIVDFGIGFGFQWPLMIQKFAQQEEGAPKLRITGIDVPQPGfrSCEMIEETGKRLADYANLFKVPFQYQGIAASRWETIKIEDLNIDEDE 184 *******************************************9*9*********************************************** PP GRAS 201 alaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl.eaklpreseerikvErellgr 292 +l++n+++++++l +e+ +++s rd+vLk+++ ++Pk+++ + ++s+ F +rf e + +ys++fd+l ++ +pr++++r+++Er+++g+ TRIDC1AG003170.1 185 VLIINCMFRMKNLGHETEAINSVRDKVLKIMRMMNPKIFISGTVNGLRSSPFFIKRFKEVIFHYSSMFDMLdANVVPRDNKARKMIERMIFGK 277 ***********************************************************************555689999************* PP GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 ++ n++acegaer+er e++++W++r +aGF+++p++ + + ++ +++ +++ e++g+l++gWk+r ++++S W+ TRIDC1AG003170.1 278 DALNIIACEGAERTERPESYRQWHARCVKAGFQQLPVDPAVLRIIVYMKNTFWHEEFFAVEDRGWLLQGWKGRGIYAISKWK 359 ****************************************************9999*************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 367 aa Download sequence |
NHLLASKLLK KIRQHSSADG DCSQRLAFYL ADGLEARLAG TGGQVYRNLM ERQTSTTDWL 60 DAHSLFVASC PFDRTSYYFA SQAILDVSQG KPRVHIVDFG IGFGFQWPLM IQKFAQQEEG 120 APKLRITGID VPQPGFRSCE MIEETGKRLA DYANLFKVPF QYQGIAASRW ETIKIEDLNI 180 DEDEVLIINC MFRMKNLGHE TEAINSVRDK VLKIMRMMNP KIFISGTVNG LRSSPFFIKR 240 FKEVIFHYSS MFDMLDANVV PRDNKARKMI ERMIFGKDAL NIIACEGAER TERPESYRQW 300 HARCVKAGFQ QLPVDPAVLR IIVYMKNTFW HEEFFAVEDR GWLLQGWKGR GIYAISKWKP 360 DETYDGQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37650.1 | 1e-137 | GRAS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG003170.1 |