 |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | TEY93278.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
| Family | WRKY | ||||||||
| Protein Properties | Length: 297aa MW: 34077.4 Da PI: 7.5642 | ||||||||
| Description | WRKY family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | WRKY | 75.8 | 5.1e-24 | 117 | 177 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpkvveitYegeHnhe 59
++D y+WrKYGqK++ +s++prsY+rCt++ gC++ k+v+r + d+ + ++tY +H+++
TEY93278.1 117 MEDNYAWRKYGQKSILNSDYPRSYFRCTHKqdGCKALKQVQRIRGDEIMYQTTYLIHHTCN 177
58***************************9999*************************997 PP
| |||||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 297 aa Download sequence |
MGSLSLDNFH ARKRKAMVKL MKGKEIAVQL QTLLHENSEP VTEQQLAFQI YRSFSDTLSE 60 LSSCTTQIPA VEGGASASSS DDTRKKKMKK KRGVKDLRGC YKRRRTSDSW VTLSPSMEDN 120 YAWRKYGQKS ILNSDYPRSY FRCTHKQDGC KALKQVQRIR GDEIMYQTTY LIHHTCNETL 180 RTRPLIVDSD PIDPNLISFQ TSITLEQDQH CNHSSKKPLI VSSVKHEICV SEDASHEAKS 240 TLEDPWNEIT GLDTLGYKPV WTPYQDEVES ASLDGLHMEV NQLCGIQNFH YFDDHMY |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 84 | 105 | RKKKMKKKRGVKDLRGCYKRRR |
| 2 | 85 | 106 | RKKKMKKKRGVKDLRGCYKRRR |
| 3 | 89 | 110 | RKKKMKKKRGVKDLRGCYKRRR |
| 4 | 90 | 111 | RKKKMKKKRGVKDLRGCYKRRR |
| 5 | 102 | 129 | KRRRTSDSWVTLSPSMEDNYAWRKYGQK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G56400.1 | 3e-36 | WRKY family protein | ||||
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
Supported By
|