PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY93247.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | NF-YB | ||||||||
Protein Properties | Length: 219aa MW: 24579.8 Da PI: 6.1705 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 173.2 | 2.8e-54 | 50 | 144 | 1 | 95 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqdrf+Pianv+rim+k+lP +akis+daket+qecvse+isf+tsea+d+cqre+rkti+++d+lwa+++lGf+dy+epl+vyl++yre++g TEY93247.1 50 VREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITSEANDRCQREQRKTITAEDVLWAMSKLGFDDYIEPLTVYLHRYREFDG 144 69******************************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MELGENNGGG GFHGYRRLPT PNSELKAADM SMGLPSPQTN PGGDESECIV REQDRFMPIA 60 NVIRIMRKIL PPHAKISDDA KETIQECVSE YISFITSEAN DRCQREQRKT ITAEDVLWAM 120 SKLGFDDYIE PLTVYLHRYR EFDGGERGSL RGEPLVKRMV DHNTMGFHAF PPPAFHHIPH 180 HHAFFGAAPM NFFKDSPNAG PSQAAVACID PFPQLKDQL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47670.2 | 1e-66 | NF-YB family protein |