PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY92653.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 288aa MW: 32418.3 Da PI: 8.0063

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY92653.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.2	6.4e-05	128	147	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ TEY92653.1 128 FSCPLCFKTFNRYNNMQMHM 147 89*****************9 PP
2	zf-C2H2	11.2	0.0011	212	234	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +C k F + + ++H +++ TEY92653.1 212 FVCRKCAKAFAVRGDWRTHEKNC 234 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MTDPFFNYFF NPSMNHFTPY TFTCHNSSLP PTEALPLLSL EPSDHQDQSS SSALELDGNN 60 NNNQGLRVSL SLGLPFTDSD PTSGHSSTSS AAANEEIEEV TVANTNPLNK GQYWIPTPSQ 120 ILIGPTQFSC PLCFKTFNRY NNMQMHMWGH GSQYRRGAES LRGAQPTAML RLPCYCCAGG 180 CRNNIDHPRG KPLKDFRTLQ THYKRKHGIK PFVCRKCAKA FAVRGDWRTH EKNCGKLWYC 240 TCGSDFKHKR SLMDHIKAFG NGHDAYGVRC FQEEDVASQI EHHNESSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-118	C2H2 family protein