PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY92568.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 479aa    MW: 53226.6 Da    PI: 5.1084
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY92568.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS291.42.3e-891314782374
        GRAS   2 velLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 v+ L++ Ae++++++ +l q +Larl+++ +sp+g+p+qR+a+yf+eAL++ l++         ++++   ++ +++++a+k+fs +sPi+ fs +taN
  TEY92568.1 131 VDELIRLAECFETNSIQLGQVILARLNQRlRSPSGKPLQRAAFYFKEALQSLLTG---------STQN---SEIIQTIKAHKTFSSISPIPMFSSFTAN 217
                 678*************************99*************************.........3333...459************************* PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                 qa+l+av+g+++vH++Dfdi+ G++W++++++L++++  +  p lRi ++++++   + +++ + e L++fA+el + fe+++++ +++e l+++++++
  TEY92568.1 218 QAVLDAVDGSTHVHVVDFDIGLGGHWASFIRELSEKSenSRRPALRISALVPED--YAAQTRLISESLTQFARELSIGFEIDFIAIRTFEYLSFKSIKF 314
                 ***********************************99666789*********55..999999************************************* PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvv.veqeadh..nsesFlerflealeyysalfdsl.eaklpres.eerikvErell 290
                  +gE++aV l+ +++r +          + +L+ ++++ P+vvvv v+ e ++  +++s+ + ++e le+ys+l++sl +a++++   e+++k+E++++
  TEY92568.1 315 LEGEKVAVLLSPAIFRQV------G---SGFLNDLRRVAPQVVVVqVDGEGQMgfGTASYRQAVIEGLEVYSTLLESLeAANFSNCGgEWMRKIEEFVV 404
                 **************9998......4...48***********998756777555459**********************66677665589********** PP

        GRAS 291 greivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  ++iv++   +ga+          Wre++ +aG+++v +s++a+ qa++llr+v+++g++v +++++++l+W+drpLv++SaWr
  TEY92568.1 405 YPKIVEAAGRRGAA----------WREAMVAAGMRQVGMSQFAEFQAECLLRRVQVRGFHVVKRQAEMLLCWHDRPLVATSAWR 478
                 ****9988888887..........***********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 479 aa     Download sequence    
MKVPFPAYNP NPNLKPASAY EPKSVLDLRG SPSPVADLKP ASILEDHVLI TPQLDDWDSL  60
MRDLGLHDDP NPVSKPFPQP DPTLPDFPPA NSFDESAQFV ASDFGLLPDI QPYTQNPNPI  120
GSLTDVGFDY VDELIRLAEC FETNSIQLGQ VILARLNQRL RSPSGKPLQR AAFYFKEALQ  180
SLLTGSTQNS EIIQTIKAHK TFSSISPIPM FSSFTANQAV LDAVDGSTHV HVVDFDIGLG  240
GHWASFIREL SEKSENSRRP ALRISALVPE DYAAQTRLIS ESLTQFAREL SIGFEIDFIA  300
IRTFEYLSFK SIKFLEGEKV AVLLSPAIFR QVGSGFLNDL RRVAPQVVVV QVDGEGQMGF  360
GTASYRQAVI EGLEVYSTLL ESLEAANFSN CGGEWMRKIE EFVVYPKIVE AAGRRGAAWR  420
EAMVAAGMRQ VGMSQFAEFQ AECLLRRVQV RGFHVVKRQA EMLLCWHDRP LVATSAWRF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36710.11e-118GRAS family protein