PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY92566.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 512aa MW: 53849.5 Da PI: 8.1759

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY92566.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.6	2.2e-05	53	75	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H TEY92566.1 53 FVCEICSKGFQRDQNLQLHRRGH 75 89*******************88 PP
2	zf-C2H2	12.4	0.00049	129	151	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k+H + + TEY92566.1 129 WKCHKCSKKYAVQSDWKVHSKIC 151 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MNESAASGDS SSGNQTTPPK PTEKKKRNLP GMPDPEAEVI ALSPKTLMAT NRFVCEICSK 60 GFQRDQNLQL HRRGHNLPWK LRQRSSKDVK KRVYVCPEPS CVHHEPSRAL GDLTGIKKHF 120 CRKHGEKKWK CHKCSKKYAV QSDWKVHSKI CGTKEYKCQC GTAFSRRDSY ITHRAFCDAL 180 AGETAKAPSA AEPAADIAQD LEAGVSSSPP VSLPPQQSPA PEDPPPSDNS NHGQNRIAFG 240 VYLSLILKLL LSVTAFCLSE LLDSAAANPS SSQILEELPN VTSLATGCSS SSCSGSSGSS 300 SSNVFASLFA SSTSSANLQP QTTGFTNLFQ SISCPDYTPD VAPSSSSEPV ALCLAVNQGS 360 SIFGKVGQER RQYPPAPQPT LSATALLQKA AQVGAAAQNM SLLRGLGVVS SSSSPNSTEE 420 WSQQKMETSG GSLASGLGLG LGCDSGTGLK ELMLGTPSVF SPKHTTLDLL GLGMAASGCS 480 TSGLSALMSS VNGGLDVSAA AQPFNGREYD SQ

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MNESAASGDS SSGNQTTPPK PTEKKKRNLP GMPDPEAEVI ALSPKTLMAT NRFVCEICSK  60
GFQRDQNLQL HRRGHNLPWK LRQRSSKDVK KRVYVCPEPS CVHHEPSRAL GDLTGIKKHF  120
CRKHGEKKWK CHKCSKKYAV QSDWKVHSKI CGTKEYKCQC GTAFSRRDSY ITHRAFCDAL  180
AGETAKAPSA AEPAADIAQD LEAGVSSSPP VSLPPQQSPA PEDPPPSDNS NHGQNRIAFG  240
VYLSLILKLL LSVTAFCLSE LLDSAAANPS SSQILEELPN VTSLATGCSS SSCSGSSGSS  300
SSNVFASLFA SSTSSANLQP QTTGFTNLFQ SISCPDYTPD VAPSSSSEPV ALCLAVNQGS  360
SIFGKVGQER RQYPPAPQPT LSATALLQKA AQVGAAAQNM SLLRGLGVVS SSSSPNSTEE  420
WSQQKMETSG GSLASGLGLG LGCDSGTGLK ELMLGTPSVF SPKHTTLDLL GLGMAASGCS  480
TSGLSALMSS VNGGLDVSAA AQPFNGREYD SQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-100	C2H2 family protein