PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY92460.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 245aa MW: 27761.6 Da PI: 8.6408 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 86.6 | 1.4e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk n+qvtfskRr+g+lKKA+E+SvLCda+v ++ifs++gkl ey++ TEY92460.1 9 KRIENKVNQQVTFSKRRTGLLKKAHEISVLCDADVGLMIFSTKGKLSEYAT 59 79***********************************************86 PP | |||||||
2 | K-box | 85 | 1.6e-28 | 86 | 173 | 13 | 100 |
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 s++ el kLk ++e Lq+++ +l G++LesLs+ke q+Le+qLe slkk Rs+Kn+l+ e+i+ lqkkek++qe+n+ L++k++e TEY92460.1 86 SPGSWNVELGKLKTRLEVLQKNHSNLSGDNLESLSMKEVQNLEHQLEVSLKKLRSRKNHLMNESISMLQKKEKAMQEHNNLLSRKMKE 173 45689********************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MVRGKVEVKR IENKVNQQVT FSKRRTGLLK KAHEISVLCD ADVGLMIFST KGKLSEYATD 60 SCMERILDRY ERSSSVDGQK APDLQSPGSW NVELGKLKTR LEVLQKNHSN LSGDNLESLS 120 MKEVQNLEHQ LEVSLKKLRS RKNHLMNESI SMLQKKEKAM QEHNNLLSRK MKEKAIESTP 180 PCEARNHSTN TLSLDLEQPL SSLNTSEENE GHVGQSEPCN NNGEMAAAAP WMLHHIQMQG 240 QNRQM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60910.1 | 5e-74 | MIKC_MADS family protein |