PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY92263.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 159aa MW: 18705.5 Da PI: 9.8864 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 41.5 | 1.7e-13 | 9 | 47 | 2 | 40 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviif 40 i +k r+ tf kR +g+ KKA+ELS+LC++++ ++i TEY92263.1 9 EIPDKDGRNATFLKRTKGLKKKANELSILCGVDIGLVIH 47 5778999*****************************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MRSKIKHEEI PDKDGRNATF LKRTKGLKKK ANELSILCGV DIGLVIHKKE QSNAVLWPSP 60 ESFWSRLQEF MEFRNEERKR RMTTHEGLMK QMVQGEMENL EKLKKAIQLK ESRQLVMKSM 120 QTDSFNGFGI DQLNAMNSFA DHMIKKLQQR DNELNEDEH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 78 | 104 | RKRRMTTHEGLMKQMVQGEMENLEKLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G31640.1 | 1e-20 | M-type_MADS family protein |