PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY91349.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 449aa MW: 48339 Da PI: 8.8382

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY91349.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.9	1.8e-05	56	78	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H TEY91349.1 56 FVCEICSKGFQRDQNLQLHRRGH 78 89*******************88 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MVEMEISSPT RNGAKSEQLA EAAPPVKRRR NLPGMPDPDS EVIALSPKTL LATNRFVCEI 60 CSKGFQRDQN LQLHRRGHNL PWKLRQRTSK EVRKRVYVCP EATCVHHEPT RALGDLTGIK 120 KHFCRKHGEK KYKCERCSKK YAVQSDCKAH MKTCGSREYR CDCGTLFSRR DSFITHRAFC 180 DALALEISRP QPDIKGGGDV EPSPPPPAAS SPPQPPLTPS TLVLSPVLSI QSSERKREKT 240 HVRDLSEGLE IVTESSSSAS SSHIPPNGGV MPIMLNASTP PAFSSPAISL SLSSLFQSPS 300 QNPPRSHYAA AHQPALSATA LLQKAAQMGS TSSKSSLLHG LWLSGPTPSD SPTPDNDCIK 360 LESSSLASGL GLSPGASGFT ELMISPPTTL DFLGLGMPAG EAPSDGFSAF FSSIGGRLHH 420 MPPPAAPFAP VRAAGDTWDE AQDRKPSML

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MVEMEISSPT RNGAKSEQLA EAAPPVKRRR NLPGMPDPDS EVIALSPKTL LATNRFVCEI  60
CSKGFQRDQN LQLHRRGHNL PWKLRQRTSK EVRKRVYVCP EATCVHHEPT RALGDLTGIK  120
KHFCRKHGEK KYKCERCSKK YAVQSDCKAH MKTCGSREYR CDCGTLFSRR DSFITHRAFC  180
DALALEISRP QPDIKGGGDV EPSPPPPAAS SPPQPPLTPS TLVLSPVLSI QSSERKREKT  240
HVRDLSEGLE IVTESSSSAS SSHIPPNGGV MPIMLNASTP PAFSSPAISL SLSSLFQSPS  300
QNPPRSHYAA AHQPALSATA LLQKAAQMGS TSSKSSLLHG LWLSGPTPSD SPTPDNDCIK  360
LESSSLASGL GLSPGASGFT ELMISPPTTL DFLGLGMPAG EAPSDGFSAF FSSIGGRLHH  420
MPPPAAPFAP VRAAGDTWDE AQDRKPSML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	1e-107	C2H2 family protein