PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY90925.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB_related

Protein Properties

Length: 462aa MW: 51284.7 Da PI: 6.2878

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY90925.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	34.3	5.4e-11	5	56	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47 +++WT eE+e l +++++G g Wk I r R+ ++k++w+++ TEY90925.1 5 KQKWTSEEEEALRAGIAKHGAGKWKNIQRDPEfnhllFSRSNIDLKDKWRNL 56 79******************************99989***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MGNPKQKWTS EEEEALRAGI AKHGAGKWKN IQRDPEFNHL LFSRSNIDLK DKWRNLSVAN 60 GQGPRDKSKT PKTKADPAEA PATPLPIAQT TASVPSCQDA STDVVMLDSS RPLPDGNNAS 120 KYNSMIFEAL STLQEPNGSD SGAIANYIEQ RQEVPQNFKR ALSSRLRRLV QQDKLEKVQN 180 NCYRIKSKTE LDTRIPIARP KELQPRQVQS IGYLGNTVEE TAVSAAYKIA EAENKSFVAA 240 EAVKEAERVS MMAEDMESLL QFATDCHDQS VRGDIEMGCG SSRNQNWLAA EPEFVIRGHD 300 GPAYDVKFYD DSLLLSCGDD GRIRGWKWKE ILESEESEQG AKMKPVLDLV NPQHNGNCFD 360 ALGSSRSLWG ARSPIPENNA IAVNSQSGSI YAAAGDSCAY CWDMEKSQVK MIFTGSEDGT 420 ARIWGILQKR EVYTSKSIQK KEQVLLFHVS AVLLLILVRV GW

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MGNPKQKWTS EEEEALRAGI AKHGAGKWKN IQRDPEFNHL LFSRSNIDLK DKWRNLSVAN  60
GQGPRDKSKT PKTKADPAEA PATPLPIAQT TASVPSCQDA STDVVMLDSS RPLPDGNNAS  120
KYNSMIFEAL STLQEPNGSD SGAIANYIEQ RQEVPQNFKR ALSSRLRRLV QQDKLEKVQN  180
NCYRIKSKTE LDTRIPIARP KELQPRQVQS IGYLGNTVEE TAVSAAYKIA EAENKSFVAA  240
EAVKEAERVS MMAEDMESLL QFATDCHDQS VRGDIEMGCG SSRNQNWLAA EPEFVIRGHD  300
GPAYDVKFYD DSLLLSCGDD GRIRGWKWKE ILESEESEQG AKMKPVLDLV NPQHNGNCFD  360
ALGSSRSLWG ARSPIPENNA IAVNSQSGSI YAAAGDSCAY CWDMEKSQVK MIFTGSEDGT  420
ARIWGILQKR EVYTSKSIQK KEQVLLFHVS AVLLLILVRV GW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17520.1	5e-61	MYB_related family protein