PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY90679.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 216aa MW: 23888.7 Da PI: 8.6228

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY90679.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11	0.0014	70	92	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F + L H +H TEY90679.1 70 YECKTCSRTFASFQALGGHRASH 92 99*********999998888877 PP
2	zf-C2H2	12.5	0.00043	139	161	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F + L H+r+H TEY90679.1 139 HECSICGSEFASGQALGGHMRRH 161 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence
MSINLSEEFK RKRHRPSAIA DVDSNSSPSS TEIISANTEE DEDLANCLIL LARGRLRPQS 60 SRRKFAEDAY ECKTCSRTFA SFQALGGHRA SHRKPNSAAE LFDRKIRSPP APEAAKFGKF 120 NTIVNTPPPP IKLQMSTIHE CSICGSEFAS GQALGGHMRR HRSPPPAARS GDDSDSSDHD 180 HRRRNVFSLD LNFPAPLEEF SKPRLIFAAA AADCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	6e-36	C2H2 family protein