PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY90569.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 220aa MW: 24949 Da PI: 10.2522 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 84.4 | 6.9e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr+g++KKA ELS+LCdae+a+i+fs +gkl++yss TEY90569.1 9 KKIDNLTTRQVTFSKRRKGLFKKARELSTLCDAEIALIVFSASGKLFDYSS 59 68***********************************************96 PP | |||||||
2 | K-box | 29.6 | 2.8e-11 | 126 | 187 | 22 | 83 |
K-box 22 akLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkk 83 kL + + +L e+++l Ge L+ Lsl L +Le+ +e ++++iR++K+ l+e+ +l + TEY90569.1 126 GKLSRHLMELSIELKQLEGEHLQGLSLASLIKLEKLIEGGMSRIRKTKEFKLMEENARLNTQ 187 68999999*****************************************9999998877655 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MVRQKIEIKK IDNLTTRQVT FSKRRKGLFK KARELSTLCD AEIALIVFSA SGKLFDYSSS 60 RFSLSLSFSL SLSLTHTHTH TERSTTGVVW EVNCVMMQII QRHDHQTEFK LLKQPPLHIQ 120 GSDGLGKLSR HLMELSIELK QLEGEHLQGL SLASLIKLEK LIEGGMSRIR KTKEFKLMEE 180 NARLNTQPIE KSSKRNAFDL GIPPISDSNC SDTFLKLGLP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 2e-38 | MIKC_MADS family protein |