PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY90376.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family MIKC_MADS
Protein Properties Length: 278aa    MW: 32389.4 Da    PI: 8.004
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY90376.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF85.53.1e-27959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                k+ien+++rqvtfskRr g+lKK +ELSvLCda++ +i+fs++gkl ey++
  TEY90376.1  9 KKIENNTRRQVTFSKRRSGLLKKTHELSVLCDAQIGLIVFSTKGKLTEYCT 59
                68***********************************************96 PP

2K-box46.61.5e-161312091794
       K-box  17 lqqelakLkkeienLq.reqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaL 94 
                   +el+++++e++nL+ + + +++ +dL+ L ++eL  Le+q+e sl+++R++K +l+ eq+e+l++ e  +++en+++
  TEY90376.1 131 VLKELSRMRSETQNLElSLIHKYKPDDLSGLRYEELADLEHQIELSLTEVRARKFQLIQEQVENLKRTEVLMEKENQEM 209
                 5689************98899*******************************************************986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MGRGKIEMKK IENNTRRQVT FSKRRSGLLK KTHELSVLCD AQIGLIVFST KGKLTEYCTP  60
SDIRSDLSKF EILVVNCLLV SPYNFMCKIL YLAINLKLLL LNHGSMKQII ERYANAKGIS  120
IPEAAGYDNQ VLKELSRMRS ETQNLELSLI HKYKPDDLSG LRYEELADLE HQIELSLTEV  180
RARKFQLIQE QVENLKRTEV LMEKENQEMY NWLTSNQLQK QANMENEKHR QAITELKLIE  240
EQPLMNQFPF FGDDLHLGTL PFQTNTYHLQ PTHPNLQH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23260.23e-49MIKC_MADS family protein