PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY90376.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 278aa MW: 32389.4 Da PI: 8.004 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 85.5 | 3.1e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ien+++rqvtfskRr g+lKK +ELSvLCda++ +i+fs++gkl ey++ TEY90376.1 9 KKIENNTRRQVTFSKRRSGLLKKTHELSVLCDAQIGLIVFSTKGKLTEYCT 59 68***********************************************96 PP | |||||||
2 | K-box | 46.6 | 1.5e-16 | 131 | 209 | 17 | 94 |
K-box 17 lqqelakLkkeienLq.reqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaL 94 +el+++++e++nL+ + + +++ +dL+ L ++eL Le+q+e sl+++R++K +l+ eq+e+l++ e +++en+++ TEY90376.1 131 VLKELSRMRSETQNLElSLIHKYKPDDLSGLRYEELADLEHQIELSLTEVRARKFQLIQEQVENLKRTEVLMEKENQEM 209 5689************98899*******************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence |
MGRGKIEMKK IENNTRRQVT FSKRRSGLLK KTHELSVLCD AQIGLIVFST KGKLTEYCTP 60 SDIRSDLSKF EILVVNCLLV SPYNFMCKIL YLAINLKLLL LNHGSMKQII ERYANAKGIS 120 IPEAAGYDNQ VLKELSRMRS ETQNLELSLI HKYKPDDLSG LRYEELADLE HQIELSLTEV 180 RARKFQLIQE QVENLKRTEV LMEKENQEMY NWLTSNQLQK QANMENEKHR QAITELKLIE 240 EQPLMNQFPF FGDDLHLGTL PFQTNTYHLQ PTHPNLQH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G23260.2 | 3e-49 | MIKC_MADS family protein |