PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY90324.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 421aa MW: 46232.3 Da PI: 10.2255

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY90324.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.2	1.5e-05	192	214	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp Cg++F ++nL+ H+ + H TEY90324.1 192 SCPQCGQVFMKPENLELHQAVrH 214 6******************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MAKSRNPRNP KPKKHQEKPH SWAAVRSLFT CKYLQVQHHQ HLVHLQQQPQ DTPKSKKHPK 60 QQDTTSTTTT HETNKKQCKK KLKCSGSLCS MQKPEILISS SPNKKRAAAH LSSSESSDAS 120 ITSRSMKATT TINSSSSSSS SFLTAPSASP SVSGSFRSMP FRKLSGCYEC RMVVDPVLGM 180 TRDPSLRNTI SSCPQCGQVF MKPENLELHQ AVRHAVCELG AEDTSKNIVE IIFQSSWLKK 240 NIPVCKIDRI LKVQNTPKTI SKFEEYRDTI KAKAKAARLP KKHPRCAADG NELLRFHCTS 300 LMCSLGLSGS SNLCNSIPSC AVCSIIKNGF KVTSQVSSKG ILTTATSGKA HDSCRVAVDE 360 GKRAMLVCRV IAGRIKKNPE GNVEDYDSVA GAVGVYSSLD ELFVFNPKAI LPCFVVIYRG 420 F

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MAKSRNPRNP KPKKHQEKPH SWAAVRSLFT CKYLQVQHHQ HLVHLQQQPQ DTPKSKKHPK  60
QQDTTSTTTT HETNKKQCKK KLKCSGSLCS MQKPEILISS SPNKKRAAAH LSSSESSDAS  120
ITSRSMKATT TINSSSSSSS SFLTAPSASP SVSGSFRSMP FRKLSGCYEC RMVVDPVLGM  180
TRDPSLRNTI SSCPQCGQVF MKPENLELHQ AVRHAVCELG AEDTSKNIVE IIFQSSWLKK  240
NIPVCKIDRI LKVQNTPKTI SKFEEYRDTI KAKAKAARLP KKHPRCAADG NELLRFHCTS  300
LMCSLGLSGS SNLCNSIPSC AVCSIIKNGF KVTSQVSSKG ILTTATSGKA HDSCRVAVDE  360
GKRAMLVCRV IAGRIKKNPE GNVEDYDSVA GAVGVYSSLD ELFVFNPKAI LPCFVVIYRG  420
F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	3e-86	C2H2 family protein