PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY90243.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB_related

Protein Properties

Length: 557aa MW: 61793.5 Da PI: 5.901

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY90243.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57	4.3e-18	35	82	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTt Ed +l+++v+++G g+W+++ ++ g+ R++k+c++rw ++l TEY90243.1 35 KGPWTTAEDAILIEYVTKHGEGNWNAVQKHSGLARCGKSCRLRWANHL 82 79******************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 557 aa Download sequence
MSCESDERNP NSGVDPPPVD DGIEGNVGGN GPLKKGPWTT AEDAILIEYV TKHGEGNWNA 60 VQKHSGLARC GKSCRLRWAN HLRPDLKKGS FTAEEEHLII KLHANMGNKW ARMATEDDIS 120 HASFHCKYAC VFYSCICMVI FSIFTSSCSS SHPFHLYWQL PGRTDNEIKN YWNTRIKRRQ 180 RAGLPPDICV KSLNDNLQSD DMSNLSSGNL HHPELKSIHI PRVEFKNFDT QGLLEFPANN 240 WLDISASSLL TQGPNSPYDN KSLLPAVHPS KRFRLSEPVF NGLNAPTCNV FPGGNQYHIA 300 NSTQIGKSSV FSAYDHNPVT YHARASSLPN GSHAVSNGHS SSEPSWAMKR ELPSLQTQMG 360 TWGSPPPSSP LLSVDTLYQT PRNEQTNGLL EAVINESDAM RNSKSNSAQH TPHDSTMMDD 420 SEYALHELEW EAYEEQKSPL GHSSSSVFSE STPISGDSFD EPFSMGFPVN EEAINGALMP 480 YANNVETRNQ MIFSRPDFSV ASNFLDAVEY PTKEHKLKDA ATFLGYDLSR ESKTADAVET 540 PGYLDHDFGA WNIVPNI

Sequence ? help Back to Top

Protein Sequence Length: 557 aa Download sequence

MSCESDERNP NSGVDPPPVD DGIEGNVGGN GPLKKGPWTT AEDAILIEYV TKHGEGNWNA  60
VQKHSGLARC GKSCRLRWAN HLRPDLKKGS FTAEEEHLII KLHANMGNKW ARMATEDDIS  120
HASFHCKYAC VFYSCICMVI FSIFTSSCSS SHPFHLYWQL PGRTDNEIKN YWNTRIKRRQ  180
RAGLPPDICV KSLNDNLQSD DMSNLSSGNL HHPELKSIHI PRVEFKNFDT QGLLEFPANN  240
WLDISASSLL TQGPNSPYDN KSLLPAVHPS KRFRLSEPVF NGLNAPTCNV FPGGNQYHIA  300
NSTQIGKSSV FSAYDHNPVT YHARASSLPN GSHAVSNGHS SSEPSWAMKR ELPSLQTQMG  360
TWGSPPPSSP LLSVDTLYQT PRNEQTNGLL EAVINESDAM RNSKSNSAQH TPHDSTMMDD  420
SEYALHELEW EAYEEQKSPL GHSSSSVFSE STPISGDSFD EPFSMGFPVN EEAINGALMP  480
YANNVETRNQ MIFSRPDFSV ASNFLDAVEY PTKEHKLKDA ATFLGYDLSR ESKTADAVET  540
PGYLDHDFGA WNIVPNI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11440.1	2e-60	MYB family protein