PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY90164.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 237aa MW: 25941.3 Da PI: 8.0215

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY90164.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.3	0.0005	101	123	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H TEY90164.1 101 YECKTCNRTFPSFQALGGHRASH 123 99**********99999998887 PP
2	zf-C2H2	11	0.0013	168	190	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F + L H+r+H TEY90164.1 168 HECSICGSEFGSGQALGGHMRRH 190 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MMKLEMLEVL SDQNMIAKGK RTKRPRPSSS TSSNGGEMYH SLVSSPATSS GISTSTEEDE 60 DMANCLILLA RGKSPPQPAV PDNKFSCRKF ASPGKVGIYV YECKTCNRTF PSFQALGGHR 120 ASHKKPKTAA ETCPPPALDD QEEERGTDFR KLTTISPTHN DPNKPKMHEC SICGSEFGSG 180 QALGGHMRRH RPRNEAADEK PRNILALDLN LPAPPEEEKL QPPHVVFSAA ALVDCHY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	23	27	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	3e-51	C2H2 family protein