PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY89932.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB_related

Protein Properties

Length: 764aa MW: 84282.1 Da PI: 8.4766

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY89932.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.4	6.7e-08	664	713	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r ++T E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ TEY89932.1 664 RRPFTVAEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 713 679*********************9988889************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 764 aa Download sequence
MKVSDPGFHH AKDVQDYKAC YFCLPSRNAS AIHHLFGATK VNADLILFRH EKVYLSGVVP 60 ILVAFGLFLS QALEDWSSCF MNSLGMVLRY VIAEEIRKRS LVKRRTDDNQ MCAFDLLATV 120 AGKLLLDSEN LPSANTSSGK EQPPALGNSV GKEDKDKHKS LEEKPGDRDC YERNFLFTEI 180 VSEAPNPNSS SNKPACTQND RISRPASGIT SSDCSEKFGS AEHLVNDECK LSLGISTPSV 240 DIESSGLRIS ANSGSEEESR KDRKDIKLVS ANFRNSSISN KVPLCSSVHP EAPERKSSAL 300 VCSVDSVKFP FCRDRAPCGP LPVNRETVKL VKRDDDDNSS ECVEPSTRNK AFKPPGDHRF 360 RKFLAPKHCK ITSIVKDDER SNAERHNILN RKNVLKRQRS LRDYPFKKRK LYDCSSTSNS 420 DESITGDGMF GVSENGANED GHGSGDLPGA NAAPTSVAGG YDSFQSTNSQ VKLRIKTFRV 480 PELFIEIPET ATVGSLKCMV MEAVNTVLGG GLRVGVVLQG KKIRDDNKTL LQTGICHDNK 540 MDNLGFTLEA NPAPASIRSY PEDGQGQLLC ENPQPLARYP PAPSITQSAG QLGSHDTHLD 600 LHGSFNNFIE SDHDSAPSPP GKSLQRTTSE SKALVPVPSA KQEALAVVPL RKSKRSESTQ 660 RRIRRPFTVA EVEALVQAVE KLGTGRWRDV KLRAFDNAKH RTYVDLKDKW KTLVHTAGIS 720 PQQRRGEPVP QELLDRVLTA HAYWSQQQPK QHQLKSEPDT CLLL

Sequence ? help Back to Top

Protein Sequence Length: 764 aa Download sequence

MKVSDPGFHH AKDVQDYKAC YFCLPSRNAS AIHHLFGATK VNADLILFRH EKVYLSGVVP  60
ILVAFGLFLS QALEDWSSCF MNSLGMVLRY VIAEEIRKRS LVKRRTDDNQ MCAFDLLATV  120
AGKLLLDSEN LPSANTSSGK EQPPALGNSV GKEDKDKHKS LEEKPGDRDC YERNFLFTEI  180
VSEAPNPNSS SNKPACTQND RISRPASGIT SSDCSEKFGS AEHLVNDECK LSLGISTPSV  240
DIESSGLRIS ANSGSEEESR KDRKDIKLVS ANFRNSSISN KVPLCSSVHP EAPERKSSAL  300
VCSVDSVKFP FCRDRAPCGP LPVNRETVKL VKRDDDDNSS ECVEPSTRNK AFKPPGDHRF  360
RKFLAPKHCK ITSIVKDDER SNAERHNILN RKNVLKRQRS LRDYPFKKRK LYDCSSTSNS  420
DESITGDGMF GVSENGANED GHGSGDLPGA NAAPTSVAGG YDSFQSTNSQ VKLRIKTFRV  480
PELFIEIPET ATVGSLKCMV MEAVNTVLGG GLRVGVVLQG KKIRDDNKTL LQTGICHDNK  540
MDNLGFTLEA NPAPASIRSY PEDGQGQLLC ENPQPLARYP PAPSITQSAG QLGSHDTHLD  600
LHGSFNNFIE SDHDSAPSPP GKSLQRTTSE SKALVPVPSA KQEALAVVPL RKSKRSESTQ  660
RRIRRPFTVA EVEALVQAVE KLGTGRWRDV KLRAFDNAKH RTYVDLKDKW KTLVHTAGIS  720
PQQRRGEPVP QELLDRVLTA HAYWSQQQPK QHQLKSEPDT CLLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	396	411	KRQRSLRDYPFKKRKL
2	401	410	LRDYPFKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-113	MYB_related family protein