PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY89882.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family AP2
Protein Properties Length: 345aa    MW: 37948.5 Da    PI: 8.5552
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY89882.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2483.1e-1545103155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpseng....krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV++++++grW+++I+ +        + k+++lg f+ta  Aa+a+++a+ k++g
  TEY89882.1  45 SQYRGVTFYRRTGRWESHIWSFFFFHvfmdCGKQVYLGGFDTALAAARAYDRAAIKFRG 103
                 78*******************54533454445************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MFDLNLNNCD GTCSSPDGQG LLTRDLFPVK VQPRKGRRGP RSRSSQYRGV TFYRRTGRWE  60
SHIWSFFFFH VFMDCGKQVY LGGFDTALAA ARAYDRAAIK FRGVEADINF TLPDYADMNQ  120
VMNLPKEEFV QMLRRQSSGV SRGGSKIRGV AFQKGGRWEA RTGEFLGKKY EKAAIVCDGS  180
DTVTSFETSN KNNSEAVFEL HNGGSQHDLN LDLGMSVSSP NKSVCLDSLK LHHDAQTTTT  240
LMLHGGNSAA SDIMSNLPLE GVPVTSQHPI LYNGVVVRNN EERERSAQLE LGNLACRMNG  300
HNQTAAAASS GFSSPAPSGP ASSVPYDYAN TSAYYSWLKP YLPPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.26e-49AP2 family protein