PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY89497.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

AP2

Protein Properties

Length: 458aa MW: 50448.1 Da PI: 6.5738

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY89497.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.1	7e-16	296	347	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g TEY89497.1 296 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 347 57**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence
MAPDNNNSNW LSFSLSSVEM ELNPSESQLH STPSDSHHFY PFAHNSNGWS NQKGETMYAH 60 PPKLEDFFAD ADSTETQDSS LTHIYEDLNA ISAFQAFSAN SGSDFDDSAF PAQTQSPVEL 120 VPFSQASAAP NALTLRVNSE SETKSSGRKM GDTFGQRTSI YRGVTRHRWT GRYEAHLWDN 180 SCRREGQARK GRQVEVDFNL CGIVIAPTVV ACIGIMFVVV ARCLPSRAVY LGGYDKEDKA 240 ARSYDLAALK YWGPTATTNF PVANYAKELE EMKHATKQEF IASLRRKSSG FSRGASIYRG 300 VTRHHQQGRW QARIGRVAGN KDLYLGTFAT EEEAAEAYDI AAIKFRGINA VTNFEMNRYD 360 IDAIAKSPLP LGGSAKRMKV SVEAEEKLPL CNSSGNINFS AIQPGSAIPC GVPYDTTTPY 420 YHHNLFSVGA SDAAASGSAM VSLMQPPPEF FIWPNQSY

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence

MAPDNNNSNW LSFSLSSVEM ELNPSESQLH STPSDSHHFY PFAHNSNGWS NQKGETMYAH  60
PPKLEDFFAD ADSTETQDSS LTHIYEDLNA ISAFQAFSAN SGSDFDDSAF PAQTQSPVEL  120
VPFSQASAAP NALTLRVNSE SETKSSGRKM GDTFGQRTSI YRGVTRHRWT GRYEAHLWDN  180
SCRREGQARK GRQVEVDFNL CGIVIAPTVV ACIGIMFVVV ARCLPSRAVY LGGYDKEDKA  240
ARSYDLAALK YWGPTATTNF PVANYAKELE EMKHATKQEF IASLRRKSSG FSRGASIYRG  300
VTRHHQQGRW QARIGRVAGN KDLYLGTFAT EEEAAEAYDI AAIKFRGINA VTNFEMNRYD  360
IDAIAKSPLP LGGSAKRMKV SVEAEEKLPL CNSSGNINFS AIQPGSAIPC GVPYDTTTPY  420
YHHNLFSVGA SDAAASGSAM VSLMQPPPEF FIWPNQSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10510.3	1e-132	AP2 family protein