PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY89425.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family ARF
Protein Properties Length: 902aa    MW: 100686 Da    PI: 5.8446
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY89425.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.34.2e-16138266199
                 EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE................EEETTEEEE-................ CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliy..............rkksgryvlt................ 62 
                 f+k+lt sd++++g +++p++ ae+        +   +  ++l+ +d++  +W++++i+              +       l+                
  TEY89425.1 138 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQT--PPAQELIARDLHDAEWKFRHIFreswfqpdqgrsevT-------LSlafdqfgsqyfsqpkr 227
                 99*****************************7444..44459***************99999999855444440.......445555555555555555 PP

                 ....TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  63 ....kGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                     +GW+ Fv+a++L +gD+v+F   ++++ +l+++++r+
  TEY89425.1 228 hlltTGWSVFVSAKRLVAGDSVLFI--WNDKNQLLLGIRRA 266
                 5555*********************..7888889***9997 PP
2Auxin_resp117.79.3e-39291374183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 aahaa+t+s F+v+YnPras+seFv++++k+++a+  ++vsvGmRf+m fete+ss rr++Gt++g+ dldpvrWpnS+Wrs+k
  TEY89425.1 291 AAHAAATNSCFTVFYNPRASPSEFVIPFSKYVQAVChTRVSVGMRFRMLFETEESSVRRYMGTITGIGDLDPVRWPNSHWRSVK 374
                 79*******************************997689******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 902 aa     Download sequence    
MSEVMDKTMK LSTSGLGQQH GHEGEEEKKC LNSELWHACA GPLVSLPTVG SRVVYFPQGH  60
SEQVAATTNK EVDAHFPNYP SLPPQLICQL HNVTMHADIE TDEVYAQMTL QPLTPQEQKD  120
GYLPVELGMP SRQPTNYFCK TLTASDTSTH GGFSVPRRAA EKVFPPLDFS QTPPAQELIA  180
RDLHDAEWKF RHIFRESWFQ PDQGRSEVTL SLAFDQFGSQ YFSQPKRHLL TTGWSVFVSA  240
KRLVAGDSVL FIWNDKNQLL LGIRRATRPQ TVMPSSVLSS DSMHIGLLAA AAHAAATNSC  300
FTVFYNPRAS PSEFVIPFSK YVQAVCHTRV SVGMRFRMLF ETEESSVRRY MGTITGIGDL  360
DPVRWPNSHW RSVKVGWDES TAGDRQPRVS LWEIEPLTTF PMYPSLFPLR LKRPWYPGQS  420
SSQGFYQAFL DCSSDAGNEA MNGMAWLRGE AGPQGFNSLN FQSVGMIPLM QQRFDPIGSR  480
NDLTQQYQAM LAGGGLQNFG SGELLKNQLM QFQQPVQYLS STGSHSPATQ LQHRPQSLVS  540
PQMLTDNLQR PLEQQIDNQA EKREQEHTYQ EAYFAQHNQL QQRPMFDIPS SSISKPDFAT  600
SNNKFSSSTG HSTMQNLLSS IGPEGSRNLL NFSRIGEPVL NEQSPQQSWM SRFTQSPANG  660
CSSPKTCAPF SGKDASVELE SGSLDVQTHA LFGANIDSSA ILLPTTAPVV GTVHTDMQSG  720
PSGYQNPLYG CVQDSSDVLQ NTGELDQPKD TRAFVKVYKT GSVGRSLDIT QFNSYHELRR  780
ELGQMFGVEG LLEDPPRSGW QLVFVDREND VLLLGDDPWE CWLKTSVYFC IAKLHATELT  840
VINVDRAFVN NVWYIKILSP EDVMKLGKQE AESLSMSTST EDRMSDADNT QNCLWTPVSR  900
IA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37020.10.0ARF family protein