PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY88750.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

AP2

Protein Properties

Length: 384aa MW: 42774.3 Da PI: 5.6664

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY88750.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	37.2	7.3e-12	61	116	2	55
AP2 2 gykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 ++GV++++++gr++A+++d ++n ++kr + ++ +e+Aa+ ++ a++k++g TEY88750.1 61 IHRGVTRHRWTGRYEAHLWDkTTWNSiQNKRGRQSAYDNEEDAARTYDLAALKYWG 116 68****************66669999999999******************98 PP
2	AP2	52.1	1.6e-16	159	210	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I ++ +k+ +lg++ t eeAa+a++ a+ +++g TEY88750.1 159 SKYRGVARHHHNGRWEARIGRVCG---NKYLYLGTYSTQEEAAAAYDMAAIEFRG 210 89**99*******99644...4**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MKRKSSPSSC SSSSSSCCIE SPSIATAPQS KPDAKPKPKR VRAKKNQSEN SATSAKSRSS 60 IHRGVTRHRW TGRYEAHLWD KTTWNSIQNK RGRQSAYDNE EDAARTYDLA ALKYWGPSTI 120 LNFPVEGYTN DLEEMQKLTK EEYLASLRRR SSGFSRGVSK YRGVARHHHN GRWEARIGRV 180 CGNKYLYLGT YSTQEEAAAA YDMAAIEFRG PNAVTNFDVS NYADKLKKFL PEVQVEEVHV 240 KQETNSTPPD EVQAEEKPHP VAETSSPKPE PKDSNESEGI VTMDPIEEHG HPWDLCLDTL 300 FNILPIPDMP LGKPSEVFDY KGFDDDIECI FDEPLDDNEI LQYGGQIDAA DALVVQDEKG 360 RDASTSTSPS SSPLSSVTSA CSNI

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MKRKSSPSSC SSSSSSCCIE SPSIATAPQS KPDAKPKPKR VRAKKNQSEN SATSAKSRSS  60
IHRGVTRHRW TGRYEAHLWD KTTWNSIQNK RGRQSAYDNE EDAARTYDLA ALKYWGPSTI  120
LNFPVEGYTN DLEEMQKLTK EEYLASLRRR SSGFSRGVSK YRGVARHHHN GRWEARIGRV  180
CGNKYLYLGT YSTQEEAAAA YDMAAIEFRG PNAVTNFDVS NYADKLKKFL PEVQVEEVHV  240
KQETNSTPPD EVQAEEKPHP VAETSSPKPE PKDSNESEGI VTMDPIEEHG HPWDLCLDTL  300
FNILPIPDMP LGKPSEVFDY KGFDDDIECI FDEPLDDNEI LQYGGQIDAA DALVVQDEKG  360
RDASTSTSPS SSPLSSVTSA CSNI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	2e-83	AP2 family protein