PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY88101.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LBD
Protein Properties Length: 219aa    MW: 24194.9 Da    PI: 6.5853
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY88101.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260125.23.1e-3971071100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkC k+Cv++pyf++eq + +fa +hk+FGasnv+kll++lp ++r++a+ +l+yeA+ar++dP+yG+v++i++lqqq+ +l+a+la+lk
  TEY88101.1   7 PCGACKFLRRKCIKGCVFSPYFCHEQgATHFASIHKVFGASNVSKLLAHLPVSDRSEAAITLAYEAQARLQDPIYGCVSHIFSLQQQVVNLQAQLASLK 105
                 7*************************89*********************************************************************99 PP

      DUF260  99 ee 100
                 ++
  TEY88101.1 106 QQ 107
                 98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MTGSSSPCGA CKFLRRKCIK GCVFSPYFCH EQGATHFASI HKVFGASNVS KLLAHLPVSD  60
RSEAAITLAY EAQARLQDPI YGCVSHIFSL QQQVVNLQAQ LASLKQQAAQ CIINNSSSSV  120
NPNPNDTKFY RESHSLPQDL HSWLQNQMET PQFDAKNTYY SGVSMDLSAS ASVKHENSNF  180
GEQNPSYGSM DSFEDQQWPY QDAGDDLQSV AFGHLRLSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42440.15e-53LBD family protein