PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY87888.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family MIKC_MADS
Protein Properties Length: 242aa    MW: 27620.3 Da    PI: 8.8419
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY87888.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF99.81e-31959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s
  TEY87888.1  9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59
                79***********************************************96 PP

2K-box90.62.9e-308517510100
       K-box  10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                  ea + s+qqe+ kLk+++e Lqr+qR+llGe+L++L+ keL++Le+qL+ slk+iRs++++ +l+ +++lq+ke++l+e+nk+L+++l+e
  TEY87888.1  85 REALELSSQQEYLKLKARYEALQRTQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQAMLDTLQDLQNKEHALNEANKSLKQRLME 175
                 45556689*******************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCSS  60
SSMLKTLERY QKCNYGAPDT SVSTREALEL SSQQEYLKLK ARYEALQRTQ RNLLGEELGP  120
LNSKELESLE RQLDMSLKQI RSTRTQAMLD TLQDLQNKEH ALNEANKSLK QRLMEGNQMT  180
LTWNQNAQDV GYGRQPQHQP QADGFFHPLE CEPTLQIGYH TDPITGAAAG HSVNNYISGW  240
LP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24260.11e-125MIKC_MADS family protein