PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY87687.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 253aa MW: 29364.5 Da PI: 9.0269

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY87687.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	98.3	3.1e-31	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr+g+lKKA+E+SvLCdaeva+i+fs++gkl+eys+ TEY87687.1 9 KRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYST 59 79***********************************************96 PP
2	K-box	109.5	3.8e-36	87	175	11	99
K-box 11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + +++ e++kLk++ie Lqr++Rh++GedL+++s+k+Lq+LeqqL+++lk+iRs+Kn+ll+++i+elq+kek++qeen +L kk++ TEY87687.1 87 PESPVNWTLEHSKLKARIELLQRNHRHYMGEDLDTMSMKDLQNLEQQLDSALKTIRSRKNQLLFDSISELQRKEKAIQEENSMLAKKIK 175 455679*********************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MGRGKVQLKR IENKINRQVT FSKRRAGLLK KAHEISVLCD AEVALIVFSH KGKLFEYSTD 60 SWFSMDRILE KYERYSFAER QLIANEPESP VNWTLEHSKL KARIELLQRN HRHYMGEDLD 120 TMSMKDLQNL EQQLDSALKT IRSRKNQLLF DSISELQRKE KAIQEENSML AKKIKYKEKE 180 LGQQTQWEQR NSTTNTAALP PLPPPQPQYL MASRLPSLNM GGGTYDEESE ARRNELDLTL 240 DSLYSCHLGC FAA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69120.1	1e-110	MIKC_MADS family protein