PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY87620.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

CO-like

Protein Properties

Length: 399aa MW: 45015.5 Da PI: 5.92

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY87620.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	29.3	1.8e-09	23	66	3	40
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 r C+++ +k+++++C ++ +lC+ C ++ H+ H++v TEY87620.1 23 VRACDNCVRKRARWYCAADDAFLCDACDSTVHSAnplarrHDRV 66 578*****************************657888888876 PP
2	CCT	67	5.1e-23	344	387	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea+++RY++Kr+tR+F+KkirYe+RK +Ae+RpR+KGrFvk++ TEY87620.1 344 REARVSRYRDKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRE 387 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MQEPKQSMVS ETKLAHAVGG KSVRACDNCV RKRARWYCAA DDAFLCDACD STVHSANPLA 60 RRHDRVRLKI PSSPPSKENE ISLSLSPGGD DTKPSWHEGF TKKARTPRGQ KKKKRNGEFI 120 SNIIPQHLVP EQENCSEEES EEHLLYRVPV FDIENYGENN ALRCAKVEMN DLEGIIPSES 180 EFAADVESLL GKGLDDEAYD MEGLGIIFDC DDHDEASCLR IKAEDEEIGE KDRDFQIDLG 240 RETFELNLVY ASPINTCGEV EEDNKAGIRE KDDSGKALLK LDFDRVMSAW DHKRSPWTSG 300 ERPELSSGEW WPDCCTLGTS WTMHAYGEMA MKIGGAGAGG DGGREARVSR YRDKRRTRLF 360 SKKIRYEVRK LNAEKRPRMK GRFVKRESFA ASAFPLLNK

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MQEPKQSMVS ETKLAHAVGG KSVRACDNCV RKRARWYCAA DDAFLCDACD STVHSANPLA  60
RRHDRVRLKI PSSPPSKENE ISLSLSPGGD DTKPSWHEGF TKKARTPRGQ KKKKRNGEFI  120
SNIIPQHLVP EQENCSEEES EEHLLYRVPV FDIENYGENN ALRCAKVEMN DLEGIIPSES  180
EFAADVESLL GKGLDDEAYD MEGLGIIFDC DDHDEASCLR IKAEDEEIGE KDRDFQIDLG  240
RETFELNLVY ASPINTCGEV EEDNKAGIRE KDDSGKALLK LDFDRVMSAW DHKRSPWTSG  300
ERPELSSGEW WPDCCTLGTS WTMHAYGEMA MKIGGAGAGG DGGREARVSR YRDKRRTRLF  360
SKKIRYEVRK LNAEKRPRMK GRFVKRESFA ASAFPLLNK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	355	371	RRTRLFSKKIRYEVRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25440.1	2e-69	CO-like family protein