PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY87283.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 428aa MW: 47309.6 Da PI: 8.4812

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY87283.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.5	4.9e-05	91	113	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C+ C+k F r nL+ H r H TEY87283.1 91 YICEVCHKGFQRDQNLQLHRRGH 113 89*******************88 PP
2	zf-C2H2	13.3	0.00024	167	189	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H + + TEY87283.1 167 WKCDKCSKRYAVQSDWKAHAKIC 189 58*****************9987 PP
3	zf-C2H2	11.6	0.00085	197	215	5	23
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg+ Fsrk+++++H + TEY87283.1 197 DCGTNFSRKDSFVTHRAFC 215 8**************8765 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MQHIIMQSIF VEDFGEEHHF QPHSPTDTAG DVSTSRPLST LSSKKKRNLP GNPGKLHLIL 60 DLLQTLLYPK HYPDAEVVAL SPRTLMATNR YICEVCHKGF QRDQNLQLHR RGHNLPWKLK 120 QRPATQAKKQ VYVCPEPNCV HHNPARPLGD LTGIKKHYCR KHGDKKWKCD KCSKRYAVQS 180 DWKAHAKICG TREYRCDCGT NFSRKDSFVT HRAFCDALNK ENYMAKHNAG EAMVQNHAEE 240 VLHASVDLSC HEPLSLSTHG MMMASSFNPF YSPRTLKPAA IGGLSSPPLA ADSVYTSATA 300 LLQRAAQMGS KTSDNTSLSP ILLRGFTGYF TQTRNIADKG STEAGFNAAA PQTSTASSGM 360 LRGDVAEMGL YDLSVFMGSS GGGHSSGLVL QEQEKMTVDF LGVAPPTFSG ATEYGDERQC 420 LEDVHSQW

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MQHIIMQSIF VEDFGEEHHF QPHSPTDTAG DVSTSRPLST LSSKKKRNLP GNPGKLHLIL  60
DLLQTLLYPK HYPDAEVVAL SPRTLMATNR YICEVCHKGF QRDQNLQLHR RGHNLPWKLK  120
QRPATQAKKQ VYVCPEPNCV HHNPARPLGD LTGIKKHYCR KHGDKKWKCD KCSKRYAVQS  180
DWKAHAKICG TREYRCDCGT NFSRKDSFVT HRAFCDALNK ENYMAKHNAG EAMVQNHAEE  240
VLHASVDLSC HEPLSLSTHG MMMASSFNPF YSPRTLKPAA IGGLSSPPLA ADSVYTSATA  300
LLQRAAQMGS KTSDNTSLSP ILLRGFTGYF TQTRNIADKG STEAGFNAAA PQTSTASSGM  360
LRGDVAEMGL YDLSVFMGSS GGGHSSGLVL QEQEKMTVDF LGVAPPTFSG ATEYGDERQC  420
LEDVHSQW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02670.1	1e-100	C2H2 family protein