PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY87042.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 230aa MW: 25686 Da PI: 8.6955

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY87042.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.8	0.00035	77	99	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C k+F ++ L H++ H TEY87042.1 77 FDCQYCLKVFANSQALGGHQNAH 99 77******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MGKNSAYSSS QENSNCNKKL KLFGVELDQS DHDANNNNNN NKGWSERDES VNSSGSSTVT 60 DKAGPTEGGP EAEDRKFDCQ YCLKVFANSQ ALGGHQNAHK KERLRKKRLQ LQARKASINC 120 YIQPFYYNNN NQNSYGSNSA WFYDPSSHPP EFSAYEDQQP QISFSGPEIS RSWAGVDRVS 180 LHQDTRAFNL THASTRPLII NKGSSLPNSN KNCTRKNLDL QLGLSLQSTI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G27880.1	1e-08	C2H2 family protein