PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY86862.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 231aa MW: 26346.1 Da PI: 9.6952 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 95.9 | 1.7e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELS+LCdae a+iifss+gklye++s TEY86862.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSILCDAELALIIFSSKGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 85.8 | 9e-29 | 85 | 172 | 12 | 99 |
K-box 12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++ s++ e kLk+++e Lq++qRhllGedL++ ++eL qLe L+ sl++iRsk++++++eq++ lq+kek+l ++n+aLrkkle TEY86862.1 85 DDERSSYLECLKLKSRVEVLQQSQRHLLGEDLGKFGVRELDQLECVLDASLNRIRSKQTQHMFEQLSGLQRKEKDLMDINRALRKKLE 172 45678899******************************************************************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MGRGKVELKR IENKINRQVT FAKRRNGLLK KAYELSILCD AELALIIFSS KGKLYEFCSS 60 SSMAKTLERY HKSSYGLIES QQSPDDERSS YLECLKLKSR VEVLQQSQRH LLGEDLGKFG 120 VRELDQLECV LDASLNRIRS KQTQHMFEQL SGLQRKEKDL MDINRALRKK LEGGSDQPVP 180 YRPQPAARPQ VFFEPLAAND STLIRYNSQV GQNNAEGSSQ NVNAILPAWM H |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02310.1 | 3e-81 | MIKC_MADS family protein |