PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY86761.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 192aa MW: 20383.6 Da PI: 9.0601 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 44.3 | 2.3e-14 | 153 | 192 | 2 | 41 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifs 41 +ienks qv +kRr g++ KA LS+LC+aeva+++ s TEY86761.1 153 KIENKSSLQVACTKRRGGLFRKATKLSILCGAEVAILVQS 192 69**********************************9965 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MESLVALRKS PPRRLVQATC RLDLFSIFLI GIFLLPRVLC CWNSPFLLEA AVAYKIVHHE 60 GEEGPDDRGN LSSLVLLMIE GLGGGGGDNG FAAGVVVDGG SGEGAGGDLA GGGGSDNVHD 120 PILYFHIATV ASSKNGEFQR HKTLGRRKIP MRKIENKSSL QVACTKRRGG LFRKATKLSI 180 LCGAEVAILV QS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60440.1 | 9e-14 | M-type_MADS family protein |