PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY85536.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | C2H2 | ||||||||
Protein Properties | Length: 178aa MW: 20439.4 Da PI: 9.0986 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.2 | 0.0012 | 87 | 109 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k F++ L H +H TEY85536.1 87 YRCEECKKLFRSYQALGGHRASH 109 9***********99999998887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MEKKQRCKLC FRKFANGRAL GGHMRSHVMK FYAEDSLPSS SEETESSISD TTPEEHVAHC 60 LMMMSRDTWH RRYDKEDEEK VIVKNKYRCE ECKKLFRSYQ ALGGHRASHK KIKVGGIKIH 120 HCPFCHRIFS SGQALGGHKR SHFIQNSSTI SQVFSIDLNL PAPVDEDEGT QIAISMLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60580.1 | 1e-26 | C2H2 family protein |